RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PKNOX1P55347 436 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 RHOAP61586 193 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 TBL3Q12788 808 aaKnown RBP16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 TRAF2Q12933 501 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 PIANPQ8IYJ0 282 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 KDM1BQ8NB78 822 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 RDH11Q8TC12 318 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 CMTM5Q96DZ9 223 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 SLC45A3Q96JT2 553 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 NSUN5Q96P11 429 aaKnown RBP16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 POLR3BQ9NW08 1133 aaPredicted RBP16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 CLEC4EQ9ULY5 219 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 KDELR3O43731 214 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 PRLP01236 227 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 COL6A2P12110 1019 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 ALOX15P16050 662 aaPredicted RBP16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 ITGB6P18564 788 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 GNAZP19086 355 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 C1QTNF8P60827 252 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 C1QTNF12Q5T7M4 302 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 PSAPL1Q6NUJ1 521 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 TMEM150AQ86TG1 271 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 CUZD1Q86UP6 607 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 CCDC117Q8IWD4 279 aaPredicted RBP16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 GABPB2Q8TAK5 448 aaPredicted RBP16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 RCN3Q96D15 328 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 TMA16Q96EY4 203 aaKnown RBP16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 TSPAN17Q96FV3 270 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 ABCG8Q9H221 673 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 CCDC68Q9H2F9 335 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 INSL5Q9Y5Q6 135 aa16.81■□□□□ 0.28
LAPTM4B-201ENST00000445593 NDUFS3O75489 264 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 GFAPP14136 432 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 SULT2A1Q06520 285 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 PAQR3Q6TCH7 311 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 CAMK1DQ8IU85 385 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 APCDD1Q8J025 514 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 PTGR2Q8N8N7 351 aaPredicted RBP16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 RSRC1Q96IZ7 334 aaKnown RBP16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 TNKS2Q9H2K2 1166 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 OGDHLQ9ULD0 1010 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 BACE2Q9Y5Z0 518 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 CEP290O15078 2479 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 NIPSNAP2O75323 286 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 ARL1P40616 181 aaPredicted RBP16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 PTPRNQ16849 979 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 FAM91A1Q658Y4 838 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 SDCCAG8Q86SQ7 713 aaPredicted RBP16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 ISCA2Q86U28 154 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 RANBP9Q96S59 729 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 NPAS2Q99743 824 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 BEGAINQ9BUH8 593 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 KLF16Q9BXK1 252 aaPredicted RBP16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 TDRD1Q9BXT4 1180 aaKnown RBP16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 STN1Q9H668 368 aaKnown RBP16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 RMI1Q9H9A7 625 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 PPM1HQ9ULR3 514 aa16.8■□□□□ 0.28
LAPTM4B-201ENST00000445593 SMAD6O43541 496 aaKnown RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 H2AFYO75367 372 aaKnown RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 ABLIM3O94929 683 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 MC4RP32245 332 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 KPNA2P52292 529 aaKnown RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 EPHB3P54753 998 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 OR4D1Q15615 310 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 TBCCQ15814 346 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 LAYNQ6UX15 382 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 GK5Q6ZS86 529 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 SLC39A11Q8N1S5 342 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 MYLIPQ8WY64 445 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 PAWRQ96IZ0 340 aaKnown RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 KCNA7Q96RP8 456 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 TRIB3Q96RU7 358 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 CDK5RAP1Q96SZ6 601 aaKnown RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 SLC30A3Q99726 388 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 FBRSL1Q9HCM7 1045 aaKnown RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 NMRK1Q9NWW6 199 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 MYOFQ9NZM1 2061 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 A0A1W2PRU2 124 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 PAPSS2O95340 614 aaPredicted RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 LRRC73Q5JTD7 316 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 MFN1Q8IWA4 741 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 FAM156AQ8NDB6 213 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 TOP1MTQ969P6 601 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 PLD4Q96BZ4 506 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 GPR21Q99679 349 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 IKZF3Q9UKT9 509 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 ZNF232Q9UNY5 417 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 MYO9BQ13459 2157 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 SUPT3HB4E1H0 165 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 UBFD1O14562 309 aaKnown RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 STX7O15400 261 aaKnown RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 SUPT3HO75486 399 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 CRTAMO95727 393 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 DSG1Q02413 1049 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 TBC1D25Q3MII6 688 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 CNKSR3Q6P9H4 555 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 PIWIL4Q7Z3Z4 852 aaKnown RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 TADA1Q96BN2 335 aa16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 EVLQ9UI08 416 aaPredicted RBP16.79■□□□□ 0.28
LAPTM4B-201ENST00000445593 CDH22Q9UJ99 828 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms