RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 CPED1A4D0V7 1026 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 SOWAHDA6NJG2 315 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 ANKRD66B4E2M5 251 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 MYF5P13349 255 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 CD86P42081 329 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 STC1P52823 247 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 CLDN6P56747 220 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 SKOR1P84550 965 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 CDK3Q00526 305 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 GUSBP11Q6P575 273 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 EFL1Q7Z2Z2 1120 aaKnown RBP18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 HEATR4Q86WZ0 1026 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 EXD1Q8NHP7 514 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 MAPK15Q8TD08 544 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 IMP4Q96G21 291 aaKnown RBP18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 RBM41Q96IZ5 413 aaKnown RBP18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 SLC25A51Q9H1U9 297 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 PADI4Q9UM07 663 aa18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 ANKRD11Q6UB99 2663 aaPredicted RBP18.8■□□□□ 0.6
ATPAF2-201ENST00000444058 APC2O95996 2303 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 ACACAQ13085 2346 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 PRSS38A1L453 326 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 MTSS1O43312 755 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 CST8O60676 142 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 TCEA3O75764 348 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 CELA2BP08218 269 aaPredicted RBP18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 DYNLT1P63172 113 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 CYP4F3Q08477 520 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 PRKD1Q15139 912 aaPredicted RBP18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 PTPRRQ15256 657 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 PPP2R5EQ16537 467 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 TEX44Q53QW1 395 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 KCTD16Q68DU8 428 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 OGFOD3Q6PK18 319 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 NPNTQ6UXI9 565 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 ADAMTSL4Q6UY14 1074 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 DAAM2Q86T65 1068 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 NT5DC3Q86UY8 548 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 LPCAT1Q8NF37 534 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 OR6C4Q8NGE1 309 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 TADA1Q96BN2 335 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 AP2M1Q96CW1 435 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 DEPDC7Q96QD5 511 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 FRMD8Q9BZ67 464 aaPredicted RBP18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 ABCG8Q9H221 673 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 GOLPH3Q9H4A6 298 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 TFR2Q9UP52 801 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 SLC17A4Q9Y2C5 497 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 PKD1L2Q7Z442 2459 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 DMXL2Q8TDJ6 3036 aa18.79■□□□□ 0.6
ATPAF2-201ENST00000444058 LRP4O75096 1905 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 hCG_1818297A0A087WSY0 165 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 RGSL1A5PLK6 1076 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 CEACAM5P06731 702 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 COPS2P61201 443 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 QPCTQ16769 361 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 RAET1GQ6H3X3 334 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 NYAP1Q6ZVC0 841 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 TFB1MQ8WVM0 346 aaKnown RBP18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 P3H4Q92791 437 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 TEKT5Q96M29 485 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 AGAP3Q96P47 875 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 TRIB3Q96RU7 358 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 MLPHQ9BV36 600 aaPredicted RBP18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 CYP4F12Q9HCS2 524 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 MRPL40Q9NQ50 206 aaKnown RBP18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 TRNAU1APQ9NX07 287 aaKnown RBP18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 IMPACTQ9P2X3 320 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 GPR34Q9UPC5 381 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 EFR3BQ9Y2G0 817 aa18.78■□□□□ 0.6
ATPAF2-201ENST00000444058 RCCD1A6NED2 376 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 PJA2O43164 708 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 SOD1P00441 154 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 CDC25BP30305 580 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 CTNNA1P35221 906 aaKnown RBP18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 GPR1P46091 355 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 RAD9BQ6WBX8 426 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 TAF8Q7Z7C8 310 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 GPR156Q8NFN8 814 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 GPBAR1Q8TDU6 330 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 SCARF2Q96GP6 870 aaPredicted RBP18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 SMIM14Q96QK8 99 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 SRPK1Q96SB4 655 aaKnown RBP18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 VAT1Q99536 393 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 BAG1Q99933 345 aaPredicted RBP18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 TMEM168Q9H0V1 697 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 SAE1Q9UBE0 346 aaPredicted RBP18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 REXO2Q9Y3B8 237 aaKnown RBP18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 PCDHA3Q9Y5H8 950 aa18.77■□□□□ 0.6
ATPAF2-201ENST00000444058 ZZEF1O43149 2961 aa18.77■□□□□ 0.59
ATPAF2-201ENST00000444058 C1orf232A0A0U1RR37 186 aa18.76■□□□□ 0.59
ATPAF2-201ENST00000444058 CLDN7O95471 211 aa18.76■□□□□ 0.59
ATPAF2-201ENST00000444058 IVLP07476 585 aa18.76■□□□□ 0.59
ATPAF2-201ENST00000444058 PECAM1P16284 738 aaPredicted RBP18.76■□□□□ 0.59
ATPAF2-201ENST00000444058 PTPN3P26045 913 aa18.76■□□□□ 0.59
ATPAF2-201ENST00000444058 MARCKSL1P49006 195 aa18.76■□□□□ 0.59
ATPAF2-201ENST00000444058 VAV2P52735 878 aa18.76■□□□□ 0.59
ATPAF2-201ENST00000444058 PEX6Q13608 980 aa18.76■□□□□ 0.59
ATPAF2-201ENST00000444058 PERM1Q5SV97 790 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms