RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 NCKIPSDQ9NZQ3 722 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 VTI1BQ9UEU0 232 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 FKBPLQ9UIM3 349 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 INTS6Q9UL03 887 aaKnown RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 STK38LQ9Y2H1 464 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 PCDHB9Q9Y5E1 797 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 ZNF106Q9H2Y7 1883 aaKnown RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 SCN8AQ9UQD0 1980 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 LINC01553A4QN01 128 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 PRR5-ARHGAP8B1AHC4 643 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 PFDN6O15212 129 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 HTRA2O43464 458 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 SMAD6O43541 496 aaKnown RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 NDUFS3O75489 264 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 IGSF6O95976 241 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 SLC4A1P02730 911 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 ENO1P06733 434 aaKnown RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 HNRNPA1P09651 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 CD1DP15813 335 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 TFEBP19484 476 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 CD9P21926 228 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 MC4RP32245 332 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 TTPAP49638 278 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 EPHB1P54762 984 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 ARHGAP8P85298 464 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 NFKB2Q00653 900 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 TEAD2Q15562 447 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 PITRM1Q5JRX3 1037 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 AARS2Q5JTZ9 985 aaKnown RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 VWA5B1Q5TIE3 1220 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 SEL1L3Q68CR1 1132 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 RINLQ6ZS11 566 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 ISCA2Q86U28 154 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 LONP2Q86WA8 852 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 MAPK15Q8TD08 544 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 MAGEC3Q8TD91 643 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 PIH1D2Q8WWB5 315 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 TCEAL4Q96EI5 215 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 SGF29Q96ES7 293 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 TM6SF2Q9BZW4 377 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 SMG9Q9H0W8 520 aaKnown RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 MAN1C1Q9NR34 630 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 PLK2Q9NYY3 685 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 IL17CQ9P0M4 197 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 DOCK6Q96HP0 2047 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 NOTCH4Q99466 2003 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 NEMP2A6NFY4 417 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 SPECC1L-ADORA2AF8WAN1 911 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 GYG2O15488 501 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 GRID2O43424 1007 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 ZBTB14O43829 449 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 ZNF821O75541 412 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 RFPL2O75678 378 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 SRP72O76094 671 aaKnown RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 RHOP08100 348 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 POU2F2P09086 479 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 PRSS56P0CW18 603 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 TCF3P15923 654 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 HMGCLP35914 325 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 CCR10P46092 362 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 XIAPP98170 497 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 BCL2L1Q07817 233 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 GALNT1Q10472 559 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 PEX6Q13608 980 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 UBAP2LQ14157 1087 aaKnown RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 SLC9B1Q4ZJI4 515 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 PSAPL1Q6NUJ1 521 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 KIRREL3Q8IZU9 778 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 TEX9Q8N6V9 391 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 CCNYL1Q8N7R7 359 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 ZNF557Q8N988 423 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 FAM13CQ8NE31 585 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 RHEBL1Q8TAI7 183 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 ISG20Q96AZ6 181 aaKnown RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 PTERQ96BW5 349 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 L3HYPDHQ96EM0 354 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 CADM1Q9BY67 442 aaKnown RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 CCDC68Q9H2F9 335 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 MMADHCQ9H3L0 296 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 TFB2MQ9H5Q4 396 aaKnown RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 ALG9Q9H6U8 611 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 SYTL2Q9HCH5 934 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 TCF7L2Q9NQB0 619 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 TAS2R13Q9NYV9 303 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 TAS2R1Q9NYW7 299 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 BAIAP2L1Q9UHR4 511 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 EVLQ9UI08 416 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 ZDHHC2Q9UIJ5 367 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 ZMYM5Q9UJ78 669 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 CCL26Q9Y258 94 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 HS3ST2Q9Y278 367 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 MED16Q9Y2X0 877 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 PKP3Q9Y446 797 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 COMMD10Q9Y6G5 202 aa11.75□□□□□ -0.53
SMAD3-202ENST00000439724 OAS3Q9Y6K5 1087 aaKnown RBP11.75□□□□□ -0.53
SMAD3-202ENST00000439724 A0A0J9YYE9 177 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 UBA6A0AVT1 1052 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-202ENST00000439724 A8MUI8 341 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms