RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 RAPGEF5Q92565 580 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 NAT6Q93015 286 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 TSACCQ96A04 125 aaPredicted RBP9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 CELF6Q96J87 481 aaKnown RBP9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 MS4A14Q96JA4 679 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 SNRNP25Q9BV90 132 aaKnown RBP9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 LRRC61Q9BV99 259 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 BOCQ9BWV1 1114 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 CPEB1Q9BZB8 566 aaKnown RBP9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 CARD9Q9H257 536 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 SUV39H2Q9H5I1 410 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 DHX35Q9H5Z1 703 aaKnown RBP9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 PCDH12Q9NPG4 1184 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 LHX3Q9UBR4 397 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 CDC23Q9UJX2 597 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 PADI4Q9UM07 663 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 AP4E1Q9UPM8 1137 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 SATB2Q9UPW6 733 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 MFHAS1Q9Y4C4 1052 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 COL6A6A6NMZ7 2263 aa9.25□□□□□ -0.93
AC011228.1-201ENST00000439027 TEX51A0A1B0GUA7 166 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 WASH4PA8MWX3 477 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 J3KR12 359 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 TOR1BO14657 336 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 DXOO77932 396 aaKnown RBP9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 RASGRP1O95267 797 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 PRKCGP05129 697 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 PCCBP05166 539 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 CELA2BP08218 269 aaPredicted RBP9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 C6P13671 934 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 KDELR1P24390 212 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 HTR1BP28222 390 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 CETN2P41208 172 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 LIG3P49916 1009 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 BLKP51451 505 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 SUOXP51687 545 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 UCNP55089 124 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 TMPRSS3P57727 454 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 ERVPABLB-1P60509 514 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 TUBB2AQ13885 445 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 SPIDRQ14159 915 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 ELOCQ15369 112 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 WSCD2Q2TBF2 565 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 PPP6R3Q5H9R7 873 aaPredicted RBP9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 SEL1L2Q5TEA6 688 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 CCDC181Q5TID7 509 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 BRICD5Q6PL45 260 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 ENPP7Q6UWV6 458 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 MFSD7Q6UXD7 560 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 CAMK1DQ8IU85 385 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 CREG2Q8IUH2 290 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 MAP7D3Q8IWC1 876 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 UMODL1-AS1Q8N2C9 162 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 FSTL5Q8N475 847 aaPredicted RBP9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 VOPP1Q96AW1 172 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 GRAMD1AQ96CP6 724 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 RBM41Q96IZ5 413 aaKnown RBP9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 HIC2Q96JB3 615 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 KCTD15Q96SI1 283 aaPredicted RBP9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 CCDC3Q9BQI4 270 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 APOOQ9BUR5 198 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 TUBB2BQ9BVA1 445 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 HEMGNQ9BXL5 484 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 CLPBQ9H078 707 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 CPNE5Q9HCH3 593 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 PCDH18Q9HCL0 1135 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 ASCL3Q9NQ33 180 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 DONSONQ9NYP3 566 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 SMARCAL1Q9NZC9 954 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 PNMA8BQ9ULN7 279 aaPredicted RBP9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 GPR34Q9UPC5 381 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 ENTPD2Q9Y5L3 495 aa9.24□□□□□ -0.93
AC011228.1-201ENST00000439027 A0A1W2PNU3 283 aaPredicted RBP9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 ARHGAP42A6NI28 874 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 C3orf70A6NLC5 250 aaPredicted RBP9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 DFFAO00273 331 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 EEF2KO00418 725 aaKnown RBP9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 CES2O00748 559 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 CASC3O15234 703 aaKnown RBP9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 PRAMEF11O60813 436 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 TCEA3O75764 348 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 TNFSF15O95150 251 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 ZIC2O95409 532 aaPredicted RBP9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 FGGP02679 453 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 CD48P09326 243 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 ALPIP09923 528 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 KRT10P13645 584 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 CDKN2BP42772 138 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 PAFAH1B1P43034 410 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 PAPOLAP51003 745 aaKnown RBP9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 ARSEP51690 589 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 HK3P52790 923 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 NDST2P52849 883 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 AIF1P55008 147 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 SRP54P61011 504 aaKnown RBP9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 INPP5AQ14642 412 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 GRM3Q14832 879 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 NFATC4Q14934 902 aa9.23□□□□□ -0.93
AC011228.1-201ENST00000439027 PDK2Q15119 407 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms