RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CHRM1P11229 460 aaPredicted RBP18.23■□□□□ 0.51
HMGN1-206ENST00000431390 KRT15P19012 456 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 FSTL4Q6MZW2 842 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 KIAA0408Q6ZU52 694 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 TRABD2AQ86V40 505 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 CHPFQ8IZ52 775 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 PIP4K2CQ8TBX8 421 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 MZB1Q8WU39 189 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 SGSM3Q96HU1 749 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 FAM129BQ96TA1 746 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 AGAP2Q99490 1192 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 PRSS16Q9NQE7 514 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 POLR3BQ9NW08 1133 aaPredicted RBP18.23■□□□□ 0.51
HMGN1-206ENST00000431390 SLC17A6Q9P2U8 582 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 GGT7Q9UJ14 662 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 PKP3Q9Y446 797 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 PSAT1Q9Y617 370 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 FANCMQ8IYD8 2048 aa18.23■□□□□ 0.51
HMGN1-206ENST00000431390 NPIPB15A6NHN6 443 aaPredicted RBP18.22■□□□□ 0.51
HMGN1-206ENST00000431390 UPK3BL1B0FP48 263 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 UPK3BL2E5RIL1 263 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 C1QTNF3-AMACRE9PGA6 284 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 GOLGA8TH3BQL2 631 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 STK25O00506 426 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 FAM155BO75949 473 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 SNRPAP09012 282 aaKnown RBP18.22■□□□□ 0.51
HMGN1-206ENST00000431390 CYP2A6P11509 494 aaPredicted RBP18.22■□□□□ 0.51
HMGN1-206ENST00000431390 ITGB7P26010 798 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 PTPRCAPQ14761 206 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 PTPRRQ15256 657 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 AFTPHQ6ULP2 937 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 STRA8Q7Z7C7 330 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 GALNT7Q86SF2 657 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 EXOC3L1Q86VI1 746 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 GPR150Q8NGU9 434 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 OR6P1Q8NGX9 317 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 SCG3Q8WXD2 468 aaKnown RBP18.22■□□□□ 0.51
HMGN1-206ENST00000431390 PPP1R16AQ96I34 528 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 GVINP1Q7Z2Y8 2422 aa18.22■□□□□ 0.51
HMGN1-206ENST00000431390 KRBA1A5PL33 1030 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 ANTXRLA6NF34 631 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 C16orf96A6NNT2 1141 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 KPNA3O00505 521 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 GOT2P00505 430 aaKnown RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 EGFP01133 1207 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 TIMP2P16035 220 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 TIE1P35590 1138 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 TMPRSS15P98073 1019 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 DNAJC3Q13217 504 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 CAMK2GQ13555 558 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 SMAD1Q15797 465 aaKnown RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 ZNF470Q6ECI4 717 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 CRTC1Q6UUV9 634 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 TRMT11Q7Z4G4 463 aaKnown RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 C2CD4AQ8NCU7 369 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 EID2BQ96D98 161 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 RBBP8Q99708 897 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 MCMBPQ9BTE3 642 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 SARDHQ9UL12 918 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 CA14Q9ULX7 337 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 CCDC162PA2VCL2 907 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 CCL22O00626 93 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 CLDN7O95471 211 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 SLC4A1P02730 911 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 ZNF30P17039 623 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 NR1D1P20393 614 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 XPAP23025 273 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 NTSR1P30989 418 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 VIPR1P32241 457 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 SPRP35270 261 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 SUOXP51687 545 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 LIMK2P53671 638 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 SEC13P55735 322 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 MRPS21P82921 87 aaKnown RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 ILF2Q12905 390 aaKnown RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 FBXO43Q4G163 708 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 SLC44A4Q53GD3 710 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 SDE2Q6IQ49 451 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 PARS2Q7L3T8 475 aaKnown RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 PTAR1Q7Z6K3 402 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-206ENST00000431390 OR4L1Q8NH43 312 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 FAM76AQ8TAV0 307 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 GABRG3Q99928 467 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 ZDHHC4Q9NPG8 344 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 WNT16Q9UBV4 365 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 B4GALT6Q9UBX8 382 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 FBXO5Q9UKT4 447 aa18.21■□□□□ 0.51
HMGN1-206ENST00000431390 TRIM49D1C9J1S8 452 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 SLC1A2P43004 574 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 FAM46CQ5VWP2 391 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 LRRC66Q68CR7 880 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 MRNIPQ6NTE8 343 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 TIFABQ6ZNK6 161 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 TTC7BQ86TV6 843 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 TSPAN33Q86UF1 283 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 CILP2Q8IUL8 1156 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 DENND6AQ8IWF6 608 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 SRRM1Q8IYB3 904 aaKnown RBP18.2■□□□□ 0.5
HMGN1-206ENST00000431390 CBARPQ8N350 705 aaPredicted RBP18.2■□□□□ 0.5
HMGN1-206ENST00000431390 FAM3CQ92520 227 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms