RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 MYO1FO00160 1098 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 GYPCP04921 128 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 CCNB1P14635 433 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 CCKBRP32239 447 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 VAC14Q08AM6 782 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 CLN3Q13286 438 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 EIF3IQ13347 325 aaKnown RBP17.06■□□□□ 0.32
TRIM39-209ENST00000428728 DPYSL3Q14195 570 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 HLTFQ14527 1009 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRIM39-209ENST00000428728 HADHQ16836 314 aaKnown RBP17.06■□□□□ 0.32
TRIM39-209ENST00000428728 MAP9Q49MG5 647 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 ATP13A4Q4VNC1 1196 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 RALGPS1Q5JS13 557 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 OGFOD3Q6PK18 319 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 PTCD2Q8WV60 388 aaKnown RBP17.06■□□□□ 0.32
TRIM39-209ENST00000428728 SMIM14Q96QK8 99 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 TEX101Q9BY14 249 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 FRMD8Q9BZ67 464 aaPredicted RBP17.06■□□□□ 0.32
TRIM39-209ENST00000428728 KCTD5Q9NXV2 234 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 IFNKQ9P0W0 207 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 CD84Q9UIB8 345 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 APPL1Q9UKG1 709 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 SUFUQ9UMX1 484 aa17.06■□□□□ 0.32
TRIM39-209ENST00000428728 LUC7L2Q9Y383 392 aaKnown RBP17.06■□□□□ 0.32
TRIM39-209ENST00000428728 MGAQ8IWI9 3026 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 PSMD11O00231 422 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 FUCA1P04066 466 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 CEACAM5P06731 702 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 PDHA1P08559 390 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 JMJD7P0C870 316 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 IL4RP24394 825 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 AK4P27144 223 aaPredicted RBP17.05■□□□□ 0.32
TRIM39-209ENST00000428728 SLC5A2P31639 672 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 GARSP41250 739 aaKnown RBP17.05■□□□□ 0.32
TRIM39-209ENST00000428728 RHDQ02161 417 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 DSC2Q02487 901 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 GALNT2Q10471 571 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 ILF3Q12906 894 aaKnown RBP eCLIP17.05■□□□□ 0.32
TRIM39-209ENST00000428728 LRRC66Q68CR7 880 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 NCBP2-AS2Q69YL0 99 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 SLC30A9Q6PML9 568 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 RFLNAQ6ZTI6 216 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 LSM14AQ8ND56 463 aaKnown RBP17.05■□□□□ 0.32
TRIM39-209ENST00000428728 GPBAR1Q8TDU6 330 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 ZDHHC1Q8WTX9 485 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 SCRN2Q96FV2 425 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 MCCC1Q96RQ3 725 aaPredicted RBP17.05■□□□□ 0.32
TRIM39-209ENST00000428728 GSDMCQ9BYG8 508 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 POLR1EQ9GZS1 481 aaKnown RBP17.05■□□□□ 0.32
TRIM39-209ENST00000428728 SPATS2LQ9NUQ6 558 aaKnown RBP17.05■□□□□ 0.32
TRIM39-209ENST00000428728 LOXL2Q9Y4K0 774 aa17.05■□□□□ 0.32
TRIM39-209ENST00000428728 TMX2-CTNND1H3BSU7 103 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 NUDT21O43809 227 aaKnown RBP17.04■□□□□ 0.32
TRIM39-209ENST00000428728 PNLIPP16233 465 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 ITIH1P19827 911 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 GPR1P46091 355 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 POLD2P49005 469 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 ARSEP51690 589 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 EPHB1P54762 984 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 PHF19Q5T6S3 580 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 TMPRSS9Q7Z410 1059 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 TRIM74Q86UV6 250 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 NRROSQ86YC3 692 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 ZNF843Q8N446 348 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 TEX26Q8N6G2 289 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 FAM71BQ8TC56 605 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 LRRN4Q8WUT4 740 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 PIH1D2Q8WWB5 315 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 PATE1Q8WXA2 126 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 IQCDQ96DY2 449 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 TAAR2Q9P1P5 351 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 CTTNBP2NLQ9P2B4 639 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 SDK2Q58EX2 2172 aa17.04■□□□□ 0.32
TRIM39-209ENST00000428728 RHPN2P1A8MT19 583 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 KRT10P13645 584 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 CASP14P31944 242 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 TAS2R40P59535 323 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 CFHR1Q03591 330 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 BIRC2Q13490 618 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 PAFAH1B3Q15102 231 aaKnown RBP17.03■□□□□ 0.32
TRIM39-209ENST00000428728 AMZ1Q400G9 498 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 ANKRD20A8PQ5CZ79 823 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 ZFYVE27Q5T4F4 411 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 KIAA1614Q5VZ46 1190 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 TIGD7Q6NT04 549 aaPredicted RBP17.03■□□□□ 0.32
TRIM39-209ENST00000428728 CCDC81Q6ZN84 652 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 TECPR1Q7Z6L1 1165 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 LRRC49Q8IUZ0 686 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 NDUFAF2Q8N183 169 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 CBARPQ8N350 705 aaPredicted RBP17.03■□□□□ 0.32
TRIM39-209ENST00000428728 KCTD6Q8NC69 237 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 AP2M1Q96CW1 435 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 ZNF670Q9BS34 389 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 PACSIN1Q9BY11 444 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 ABCG8Q9H221 673 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 RDH14Q9HBH5 336 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 TRNAU1APQ9NX07 287 aaKnown RBP17.03■□□□□ 0.32
TRIM39-209ENST00000428728 CHKBQ9Y259 395 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 PPIL1Q9Y3C6 166 aa17.03■□□□□ 0.32
TRIM39-209ENST00000428728 AHCTF1Q8WYP5 2266 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms