RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MTMR14Q8NCE2 650 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 CLP1Q92989 425 aaKnown RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 RNF31Q96EP0 1072 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 TTPALQ9BTX7 342 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 DGCR6LQ9BY27 220 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 HBS1LQ9Y450 684 aaKnown RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 CCDC182A6NF36 153 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PEX10O60683 326 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PEX11AO75192 247 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 RNASEH2AO75792 299 aaKnown RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 RSL1D1O76021 490 aaKnown RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 CCNB2O95067 398 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 ADRB2P07550 413 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF37AP17032 561 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 SLC6A2P23975 617 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 KDELR1P24390 212 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 CASRP41180 1078 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 TNFSF9P41273 254 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PTPN9P43378 593 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 CXCR3P49682 368 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 FAAP100Q0VG06 881 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 C9orf64Q5T6V5 341 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 ZCCHC12Q6PEW1 402 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 POMZP3Q6PJE2 187 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 LBX2Q6XYB7 198 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 UBR7Q8N806 425 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 KBTBD8Q8NFY9 601 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PTCD2Q8WV60 388 aaKnown RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PANX1Q96RD7 426 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 FUCA2Q9BTY2 467 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 SEMA6AQ9H2E6 1030 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 POLMQ9NP87 494 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 MCUBQ9NWR8 336 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 ABCC6O95255 1503 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 DCXO43602 365 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 UGT2B17O75795 530 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 MMP3P08254 477 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PPP3CAQ08209 521 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 SCRN3Q0VDG4 424 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 DGCR6Q14129 220 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 RFTN2Q52LD8 501 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 SRFBP1Q8NEF9 429 aaKnown RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 ZHX1-C8orf76Q96EF9 292 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 ARMCX1Q9P291 453 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 COPS7AQ9UBW8 275 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PCDHGA3Q9Y5H0 932 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 CLUHO75153 1309 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 A0A1W2PQ72 361 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 HAT1O14929 419 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 BUD23O43709 281 aaKnown RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 CDH3P22223 829 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 VBP1P61758 197 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 SP2Q02086 613 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 IL17AQ16552 155 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 AMIGO1Q86WK6 493 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 TCAIMQ8N3R3 496 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 C1orf50Q9BV19 199 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PAIP1Q9H074 479 aaKnown RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 INTS10Q9NVR2 710 aaKnown RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 NDRG2Q9UN36 371 aaKnown RBP8.94□□□□□ -0.98
CTNND1-208ENST00000428599 ERVK-11Q9UQG0 969 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 ROBO3Q96MS0 1386 aa8.94□□□□□ -0.98
CTNND1-208ENST00000428599 PGRMC2O15173 223 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 B4GALT5O43286 388 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 PPP1R11O60927 126 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ATG13O75143 517 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 GATBO75879 557 aaKnown RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ATP4AP20648 1035 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 CMPK1P30085 196 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SSTR1P30872 391 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 HNRNPH1P31943 449 aaKnown RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SLC34A1Q06495 639 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ILF3Q12906 894 aaKnown RBP eCLIP8.93□□□□□ -0.982e-7■■□□□ 13.8
CTNND1-208ENST00000428599 TAF5Q15542 800 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ALLCQ8N6M5 410 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 OR14C36Q8NHC7 312 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 MAML3Q96JK9 1138 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 IL12RB2Q99665 862 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ACE2Q9BYF1 805 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 TNKS2Q9H2K2 1166 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 PLEKHA1Q9HB21 404 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF222Q9UK12 451 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ASTN1O14525 1302 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 TLX3O43711 291 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ALDH3A2P51648 485 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 LARS2Q15031 903 aaKnown RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 QPRTQ15274 297 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 HSDL1Q3SXM5 330 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 CERCAMQ5T4B2 595 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 WDR59Q6PJI9 974 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 FAM183BPQ6ZVS7 135 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 KATNAL2Q8IYT4 538 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 RNF148Q8N7C7 305 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 BHLHE22Q8NFJ8 381 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 FEM1CQ96JP0 617 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 AARSD1Q9BTE6 412 aaKnown RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 MORF4L1Q9UBU8 362 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 C3orf18Q9UK00 162 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 PCDHGB5Q9Y5G0 923 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms