RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CREG2Q8IUH2 290 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 RHOBTB2Q9BYZ6 727 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 CLIC5Q9NZA1 410 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 MYH7P12883 1935 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 CABYRO75952 493 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 VTNP04004 478 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 ADNP2Q6IQ32 1131 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 FOXR2Q6PJQ5 311 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 PCDH20Q8N6Y1 951 aaKnown RBP14.44□□□□□ -0.1
PTPN13-203ENST00000427191 EFCAB3Q8N7B9 438 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 SPATA9Q9BWV2 254 aa14.44□□□□□ -0.1
PTPN13-203ENST00000427191 ZNF567Q8N184 647 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 TSEN15Q8WW01 171 aaKnown RBP14.43□□□□□ -0.1
PTPN13-203ENST00000427191 SETD4Q9NVD3 440 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 PCDHB1Q9Y5F3 818 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 RANBP3LQ86VV4 465 aaPredicted RBP14.43□□□□□ -0.1
PTPN13-203ENST00000427191 BRD9Q9H8M2 597 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 SEC14L3Q9UDX4 400 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 RAB23Q9ULC3 237 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 PCDHGB1Q9Y5G3 927 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 NWD1Q149M9 1564 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 NDUFS2O75306 463 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 SLC35G4P0C7Q5 338 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 OR2T12Q8NG77 320 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 RAB2BQ8WUD1 216 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 EDEM1Q92611 657 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 ART4Q93070 314 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 DIRAS2Q96HU8 199 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 CDH19Q9H159 772 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 ZDHHC6Q9H6R6 413 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 SMPD3Q9NY59 655 aaPredicted RBP14.43□□□□□ -0.1
PTPN13-203ENST00000427191 GAKO14976 1311 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 PGRP06401 933 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 TPH1P17752 444 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 HNF4AP41235 474 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 MANFP55145 182 aaKnown RBP14.43□□□□□ -0.1
PTPN13-203ENST00000427191 ARPC4P59998 168 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 LIPEQ05469 1076 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 ORC1Q13415 861 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 TEAD4Q15561 434 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 TMEM119Q4V9L6 283 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 MKL1Q969V6 931 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 AP2M1Q96CW1 435 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 MTMR8Q96EF0 704 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 TMEM27Q9HBJ8 222 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 ZNF208O43345 1280 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 LIASO43766 372 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 AMPD1P23109 780 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 CD86P42081 329 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 ARMCX6Q7L4S7 300 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 SLC2A14Q8TDB8 520 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 ROPN1LQ96C74 230 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 GPRC5CQ9NQ84 441 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 CLEC4AQ9UMR7 237 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 TFR2Q9UP52 801 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 PCDHGB5Q9Y5G0 923 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 CD2P06729 351 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 TFEBP19484 476 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 IGFBP5P24593 272 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 FAM171A1Q5VUB5 890 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 LRRC69Q6ZNQ3 347 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 SLC34A3Q8N130 599 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 ZNF563Q8TA94 476 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 C1GALT1C1Q96EU7 318 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 RIOX1Q9H6W3 641 aa14.43□□□□□ -0.1
PTPN13-203ENST00000427191 PIGBOS1A0A0B4J2F0 54 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 IQCMA0A1B0GVH7 501 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 NTRK1P04629 796 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 TBC1D25Q3MII6 688 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ZIK1Q3SY52 487 aaPredicted RBP14.42□□□□□ -0.1
PTPN13-203ENST00000427191 NOL9Q5SY16 702 aaKnown RBP14.42□□□□□ -0.1
PTPN13-203ENST00000427191 METTL21CQ5VZV1 264 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 TMEM17Q86X19 198 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 DNAJC28Q9NX36 388 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ABHD14A-ACY1A0A1B0GW23 586 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ITGA2BP08514 1039 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 SMU1Q2TAY7 513 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ZCCHC23Q6ZST2 131 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ADGRG6Q86SQ4 1221 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 SLC41A1Q8IVJ1 513 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 SCUBE3Q8IX30 993 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 RC3H2Q9HBD1 1191 aaKnown RBP14.42□□□□□ -0.1
PTPN13-203ENST00000427191 C14orf105Q9NVL8 296 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 GIN1Q9NXP7 522 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ZNF224Q9NZL3 707 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 NUAK1O60285 661 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 TOP3BO95985 862 aaKnown RBP14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ECHS1P30084 290 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ATP13A4Q4VNC1 1196 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 MIIPQ5JXC2 388 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 SLC6A15Q9H2J7 730 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 OAS3Q9Y6K5 1087 aaKnown RBP14.42□□□□□ -0.1
PTPN13-203ENST00000427191 FAM172BPA6NC97 362 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 PLOD2O00469 737 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ARF4P18085 180 aaPredicted RBP14.42□□□□□ -0.1
PTPN13-203ENST00000427191 PSMB4P28070 264 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 USP43Q70EL4 1123 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 CNTD1Q8N815 330 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 POP1Q99575 1024 aaKnown RBP14.42□□□□□ -0.1
PTPN13-203ENST00000427191 CASTOR2A6NHX0 329 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms