RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 BRAT1Q6PJG6 821 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 SLC30A9Q6PML9 568 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 LIPIQ6XZB0 460 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 ARCQ7LC44 396 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 PHLDB2Q86SQ0 1253 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 DNAAF5Q86Y56 855 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 ANKRD20A12PQ8NF67 263 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 ZNF641Q96N77 438 aaPredicted RBP13.75□□□□□ -0.21
SSB-204ENST00000417292 TEFMQ96QE5 360 aaKnown RBP13.75□□□□□ -0.21
SSB-204ENST00000417292 EFHD1Q9BUP0 239 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 GSDMCQ9BYG8 508 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 APMAPQ9HDC9 416 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 PRDM8Q9NQV8 689 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 PDP2Q9P2J9 529 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 VPS4AQ9UN37 437 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 SIK3Q9Y2K2 1263 aa13.75□□□□□ -0.21
SSB-204ENST00000417292 F8VZ95 297 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 STK17BO94768 372 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 GFPT2O94808 682 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 PDGFAP04085 211 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 ELFN1P0C7U0 828 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 CYP11B1P15538 503 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 COL8A1P27658 744 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 GNPDA1P46926 289 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 MC2RQ01718 297 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 MC1RQ01726 317 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 BIRC2Q13490 618 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 CCDC14Q49A88 953 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 CFAP58Q5T655 872 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 ASB18Q6ZVZ8 466 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 KDELC2Q7Z4H8 507 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 NOP9Q86U38 636 aaKnown RBP13.74□□□□□ -0.21
SSB-204ENST00000417292 ZNF761Q86XN6 746 aaPredicted RBP13.74□□□□□ -0.21
SSB-204ENST00000417292 CCDC13Q8IYE1 715 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 CCDC185Q8N715 623 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 GALNT11Q8NCW6 608 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 STK33Q9BYT3 514 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 PDCL3Q9H2J4 239 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 TRNAU1APQ9NX07 287 aaKnown RBP13.74□□□□□ -0.21
SSB-204ENST00000417292 TMEM184BQ9Y519 407 aaPredicted RBP13.74□□□□□ -0.21
SSB-204ENST00000417292 KCTD3Q9Y597 815 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 OTOGQ6ZRI0 2925 aa13.74□□□□□ -0.21
SSB-204ENST00000417292 LRRC10BA6NIK2 292 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 A8MU76 341 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 A8MX80 341 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 RASA4BC9J798 803 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 MKRN2OSH3BPM6 223 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 PDE2AO00408 941 aaPredicted RBP13.73□□□□□ -0.21
SSB-204ENST00000417292 RASA4O43374 803 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 FURINP09958 794 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 MYCLP1P12525 358 aaPredicted RBP13.73□□□□□ -0.21
SSB-204ENST00000417292 STAT5AP42229 794 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 RGRP47804 291 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 CTBSQ01459 385 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 GRM3Q14832 879 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 IQCB1Q15051 598 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 AFMIDQ63HM1 303 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 ARHGAP22Q7Z5H3 698 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 PYROXD2Q8N2H3 581 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 RTL3Q8N8U3 475 aaKnown RBP13.73□□□□□ -0.21
SSB-204ENST00000417292 SLC20A1Q8WUM9 679 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 ECHDC3Q96DC8 303 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 DPYSL5Q9BPU6 564 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 BPIFA3Q9BQP9 254 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 FRMD8Q9BZ67 464 aaPredicted RBP13.73□□□□□ -0.21
SSB-204ENST00000417292 PDFQ9HBH1 243 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 CBX8Q9HC52 389 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 METTL5Q9NRN9 209 aaKnown RBP13.73□□□□□ -0.21
SSB-204ENST00000417292 SUFUQ9UMX1 484 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 PLEKHM1Q9Y4G2 1056 aa13.73□□□□□ -0.21
SSB-204ENST00000417292 TTLL8A6PVC2 850 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 SMTNL1A8MU46 457 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 DLGAP3O95886 979 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 MMEP08473 750 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 POLD2P49005 469 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 HDAC4P56524 1084 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 BPIFB4P59827 614 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 GPLD1P80108 840 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 SNAP47Q5SQN1 464 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 SMYD5Q6GMV2 418 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 CEACAM20Q6UY09 585 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 DPPA4Q7L190 304 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 TMEM135Q86UB9 458 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 LUZP1Q86V48 1076 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 HEATR4Q86WZ0 1026 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 RXFP2Q8WXD0 754 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 CPA5Q8WXQ8 436 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 RNF31Q96EP0 1072 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 NAP1L5Q96NT1 182 aaPredicted RBP13.72□□□□□ -0.21
SSB-204ENST00000417292 TUBGCP5Q96RT8 1024 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 TEX101Q9BY14 249 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 FBXO8Q9NRD0 319 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 UBA2Q9UBT2 640 aaPredicted RBP13.72□□□□□ -0.21
SSB-204ENST00000417292 TLK1Q9UKI8 766 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 DOPEY1Q5JWR5 2465 aa13.72□□□□□ -0.21
SSB-204ENST00000417292 MED13Q9UHV7 2174 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 J3KR12 359 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 EPHB2P29323 1055 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 SOX5P35711 763 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms