RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 BBC3Q96PG8 261 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 DNAJC7Q99615 494 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 PACSIN1Q9BY11 444 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 DPH1Q9BZG8 443 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 DPEP2Q9H4A9 486 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 CARS2Q9HA77 564 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 APPL1Q9UKG1 709 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 A0A1W2PQM1 296 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 GOLGA6CA6NDK9 693 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 GOLGA6BA6NDN3 693 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 D6RAR5 112 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 CASC3O15234 703 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 AKR1B10O60218 316 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 CEACAM5P06731 702 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 PDHA1P08559 390 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 TPM1P09493 284 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 TMEM253P0C7T8 217 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 GOLGA6DP0CG33 693 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 ZNF30P17039 623 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 CA4P22748 312 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 PDX1P52945 283 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 EPHB1P54762 984 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 UCNP55089 124 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 CDK3Q00526 305 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 EIF3IQ13347 325 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 CERCAMQ5T4B2 595 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 NLRP8Q86W28 1048 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 CCL4L1Q8NHW4 92 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 KIAA1524Q8TCG1 905 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 GPBAR1Q8TDU6 330 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 TMEM74Q96NL1 305 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 GSDMCQ9BYG8 508 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 FRMD8Q9BZ67 464 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 STRADBQ9C0K7 418 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 TRNAU1APQ9NX07 287 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 GOLGA6AQ9NYA3 693 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 DNPEPQ9ULA0 475 aa17.56■□□□□ 0.4
PDLIM2-208ENST00000416159 A0A0J9YYE9 177 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 TEX51A0A1B0GUA7 166 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 CDRT15L2A8MXV6 281 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 B4DGG1 531 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 NUDT21O43809 227 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 TNFSF15O95150 251 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 MAP3K6O95382 1288 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 TRBC1P01850 177 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 CCNB1P14635 433 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 KDELR1P24390 212 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 GPR1P46091 355 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 INHBCP55103 352 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 DSC2Q02487 901 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 ILF3Q12906 894 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 PEX6Q13608 980 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 HLTFQ14527 1009 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 PTPRRQ15256 657 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 FOXR1Q6PIV2 292 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 CCNJLQ8IV13 435 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 PQLC3Q8N755 202 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 Q8N9G6 341 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 ABCG8Q9H221 673 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 LRIT1Q9P2V4 623 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 TTLL3Q9Y4R7 772 aa17.55■□□□□ 0.4
PDLIM2-208ENST00000416159 ITPR1Q14643 2758 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 KLK10O43240 276 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 PYGLP06737 847 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 IVLP07476 585 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 CCKBRP32239 447 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 RPL26P61254 145 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 CXADRP78310 365 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 SKOR1P84550 965 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 PTSQ03393 145 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 GBE1Q04446 702 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 MESDQ14696 234 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 LRRC66Q68CR7 880 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 ZNF765Q7L2R6 523 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 CLEC14AQ86T13 490 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 NRROSQ86YC3 692 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 RAVER1Q8IY67 606 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 CCDC13Q8IYE1 715 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 FBXO39Q8N4B4 442 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 LSM14AQ8ND56 463 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 CCNYQ8ND76 341 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 SLC35G2Q8TBE7 412 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 ARRDC2Q8TBH0 407 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 RAPGEF5Q92565 580 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 AP2M1Q96CW1 435 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 HDAC11Q96DB2 347 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 ZNF830Q96NB3 372 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 RNF157Q96PX1 679 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 TDRD1Q9BXT4 1180 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 SUDS3Q9H7L9 328 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 EPB41L5Q9HCM4 733 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 SUFUQ9UMX1 484 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 RPL26L1Q9UNX3 145 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 CHKBQ9Y259 395 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 SLC17A4Q9Y2C5 497 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 RNF215Q9Y6U7 377 aa17.54■□□□□ 0.4
PDLIM2-208ENST00000416159 ZNF487B1APH4 448 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 TK2O00142 265 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 PLD2O14939 933 aa17.53■□□□□ 0.4
PDLIM2-208ENST00000416159 FUCA1P04066 466 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms