RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 NFKB2Q00653 900 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 MYBPC3Q14896 1274 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 TBPL2Q6SJ96 375 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 ANKRD23Q86SG2 305 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 ADGRG5Q8IZF4 528 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 TEX26Q8N6G2 289 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 TBATAQ96M53 351 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 TMEM79Q9BSE2 394 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 ZBED2Q9BTP6 218 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 AGPAT4Q9NRZ5 378 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 PCDHA9Q9Y5H5 950 aa9.87□□□□□ -0.83
SS18-203ENST00000415083 LOC285095A0A1B0GVY8 99 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 AKAP10O43572 662 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 ZNF135P52742 658 aaPredicted RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 NR1H2P55055 460 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 DIO3P55073 304 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 MRPS6P82932 125 aaKnown RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 PTPRRQ15256 657 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 KANK2Q63ZY3 851 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 KIAA0408Q6ZU52 694 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 BEND5Q7L4P6 421 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 ERMP1Q7Z2K6 904 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 MRPL10Q7Z7H8 261 aaKnown RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 LZTR1Q8N653 840 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 CATSPER1Q8NEC5 780 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 OR13C4Q8NGS5 318 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 DIS3LQ8TF46 1054 aaKnown RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 FSD1LQ9BXM9 530 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 CCM2LQ9NUG4 571 aaPredicted RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 CPA4Q9UI42 421 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 CROTQ9UKG9 612 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 A0A0J9YYE9 177 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 ARHGEF37A1IGU5 675 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 KPNA6O60684 536 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 TRMUO75648 421 aaKnown RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 PIRTP0C851 137 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 IL12AP29459 219 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 SERPINH1P50454 418 aaKnown RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 CLCN2P51788 898 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 CLCN5P51795 746 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 HERVK_113P63132 956 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 COG7P83436 770 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 ACVR1Q04771 509 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 FAM83EQ2M2I3 478 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 MS4A13Q5J8X5 152 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 PAGE3Q5JUK9 113 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 BRMS1LQ5PSV4 323 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 OR2T11Q8NH01 316 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 TANKQ92844 425 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 ERVK-6Q9BXR3 956 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 MFSD1Q9H3U5 465 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 POLG2Q9UHN1 485 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 SAC3D1A6NKF1 404 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 SUPT7LO94864 414 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 MTHFD1P11586 935 aaKnown RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 VARSP26640 1264 aaKnown RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 POLR2IP36954 125 aaKnown RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 ACADVLP49748 655 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 CDKN1CP49918 316 aaPredicted RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 SUOXP51687 545 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 FAM110CQ1W6H9 321 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 C9orf131Q5VYM1 1079 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 UGT3A1Q6NUS8 523 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 USP50Q70EL3 339 aaPredicted RBP9.86□□□□□ -0.83
SS18-203ENST00000415083 GALNT7Q86SF2 657 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 UMODL1-AS1Q8N2C9 162 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 CBR4Q8N4T8 237 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 FAM47BQ8NA70 645 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 RSPH1Q8WYR4 309 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 FBXL20Q96IG2 436 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 OSBPL11Q9BXB4 747 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 BTRCQ9Y297 605 aa9.86□□□□□ -0.83
SS18-203ENST00000415083 A0A0U1RQS6 177 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 AP3B1O00203 1094 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 FGF10O15520 208 aaPredicted RBP9.85□□□□□ -0.83
SS18-203ENST00000415083 PRR35P0CG20 571 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 CD247P20963 164 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 ACVRL1P37023 503 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 ATP4BP51164 291 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 STX5Q13190 355 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 RABL3Q5HYI8 236 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 AGAP9Q5VTM2 703 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 IRAK1BP1Q5VVH5 260 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 ALDH16A1Q8IZ83 802 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 OR2T34Q8NGX1 318 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 OR2T3Q8NH03 318 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 GPR152Q8TDT2 470 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 GTF3C2Q8WUA4 911 aaPredicted RBP9.85□□□□□ -0.83
SS18-203ENST00000415083 TSNARE1Q96NA8 513 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 CAAP1Q9H8G2 361 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 EVLQ9UI08 416 aaPredicted RBP9.85□□□□□ -0.83
SS18-203ENST00000415083 CDC14AQ9UNH5 594 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 OAS3Q9Y6K5 1087 aaKnown RBP9.85□□□□□ -0.83
SS18-203ENST00000415083 NR5A2O00482 541 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 AXIN1O15169 862 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 PFDN1O60925 122 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 B3GAT3O94766 335 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 GOT2P00505 430 aaKnown RBP9.85□□□□□ -0.83
SS18-203ENST00000415083 SLC4A1P02730 911 aa9.85□□□□□ -0.83
SS18-203ENST00000415083 CCR1P32246 355 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms