RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 LLGL1Q15334 1064 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 SPA17Q15506 151 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 ODF2Q5BJF6 829 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 GKN2Q86XP6 184 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 COL27A1Q8IZC6 1860 aaPredicted RBP17.68■□□□□ 0.42
LSM5-204ENST00000409909 NDUFAF2Q8N183 169 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 SDR16C5Q8N3Y7 309 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 KYQ8NBH2 561 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 PTCD2Q8WV60 388 aaKnown RBP17.68■□□□□ 0.42
LSM5-204ENST00000409909 SCG3Q8WXD2 468 aaKnown RBP17.68■□□□□ 0.42
LSM5-204ENST00000409909 GLMNQ92990 594 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 NXPE2Q96DL1 559 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 TMEM168Q9H0V1 697 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 ABCG8Q9H221 673 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 PCDH9Q9HC56 1237 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 CYP4F12Q9HCS2 524 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 HAUS2Q9NVX0 235 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 KCTD5Q9NXV2 234 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 SIRPGQ9P1W8 387 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 GULP1Q9UBP9 304 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 RALYQ9UKM9 306 aaKnown RBP17.68■□□□□ 0.42
LSM5-204ENST00000409909 PADI4Q9UM07 663 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 GPR34Q9UPC5 381 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 DOLKQ9UPQ8 538 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 EPN1Q9Y6I3 576 aaPredicted RBP17.68■□□□□ 0.42
LSM5-204ENST00000409909 FAM208BQ5VWN6 2430 aa17.68■□□□□ 0.42
LSM5-204ENST00000409909 A0A0A6YYK5 440 aaPredicted RBP17.67■□□□□ 0.42
LSM5-204ENST00000409909 PRSS38A1L453 326 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 CAPN8A6NHC0 703 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 PSTPIP1O43586 416 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 SOD1P00441 154 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 MARCKSL1P49006 195 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 STC1P52823 247 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 RPL26P61254 145 aaKnown RBP17.67■□□□□ 0.42
LSM5-204ENST00000409909 CDK3Q00526 305 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 DPTQ07507 201 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 SPOCD1Q6ZMY3 1216 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 SFTPA2Q8IWL1 248 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 ARL10Q8N8L6 244 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 LPCAT1Q8NF37 534 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 CCL4L1Q8NHW4 92 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 SCAMP4Q969E2 229 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 FRMD8Q9BZ67 464 aaPredicted RBP17.67■□□□□ 0.42
LSM5-204ENST00000409909 PHPT1Q9NRX4 125 aaPredicted RBP17.67■□□□□ 0.42
LSM5-204ENST00000409909 RPL26L1Q9UNX3 145 aaKnown RBP17.67■□□□□ 0.42
LSM5-204ENST00000409909 GPSM3Q9Y4H4 160 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 AK5Q9Y6K8 562 aa17.67■□□□□ 0.42
LSM5-204ENST00000409909 GOLGA6CA6NDK9 693 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 GOLGA6BA6NDN3 693 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 PDE2AO00408 941 aaPredicted RBP17.66■□□□□ 0.42
LSM5-204ENST00000409909 CST8O60676 142 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 CSO75390 466 aaKnown RBP17.66■□□□□ 0.42
LSM5-204ENST00000409909 NDUFA10O95299 355 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 CLDN7O95471 211 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 GOLGA6DP0CG33 693 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 PECAM1P16284 738 aaPredicted RBP17.66■□□□□ 0.42
LSM5-204ENST00000409909 ZNF30P17039 623 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 TEAD1P28347 426 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 CYLC1P35663 651 aaPredicted RBP17.66■□□□□ 0.42
LSM5-204ENST00000409909 POLD2P49005 469 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 QPCTQ16769 361 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 RAET1GQ6H3X3 334 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 TMTC1Q8IUR5 882 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 KATNAL2Q8IYT4 538 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 AP2M1Q96CW1 435 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 IMP4Q96G21 291 aaKnown RBP17.66■□□□□ 0.42
LSM5-204ENST00000409909 AGAP3Q96P47 875 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 LYSMD1Q96S90 227 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 AGAP2Q99490 1192 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 GOLGA6AQ9NYA3 693 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 SEPT10Q9P0V9 454 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 RABGEF1Q9UJ41 708 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 MOSPD1Q9UJG1 213 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 REXO2Q9Y3B8 237 aaKnown RBP17.66■□□□□ 0.42
LSM5-204ENST00000409909 DUSP10Q9Y6W6 482 aa17.66■□□□□ 0.42
LSM5-204ENST00000409909 ARHGEF17Q96PE2 2063 aaPredicted RBP17.66■□□□□ 0.42
LSM5-204ENST00000409909 LOC400499M0QZD8 3231 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 ANKRD66B4E2M5 251 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 PPP1R12AO14974 1030 aaPredicted RBP17.65■□□□□ 0.42
LSM5-204ENST00000409909 CA4P22748 312 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 TFDP2Q14188 446 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 PRKD1Q15139 912 aaPredicted RBP17.65■□□□□ 0.42
LSM5-204ENST00000409909 KAZNQ674X7 775 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 C11orf63Q6NUN7 778 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 OGFOD3Q6PK18 319 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 ADAMTSL4Q6UY14 1074 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 RAD9BQ6WBX8 426 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 TAF8Q7Z7C8 310 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 NLRP8Q86W28 1048 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 NRROSQ86YC3 692 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 FAM46DQ8NEK8 389 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 GPR156Q8NFN8 814 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 KRT35Q92764 455 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 NAT6Q93015 286 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 TADA1Q96BN2 335 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 DEPDC7Q96QD5 511 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 TRIB3Q96RU7 358 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 CCDC3Q9BQI4 270 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 ANP32EQ9BTT0 268 aa17.65■□□□□ 0.42
LSM5-204ENST00000409909 RIOK2Q9BVS4 552 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms