RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TTC31Q49AM3 519 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PPM1JQ5JR12 505 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 MRNIPQ6NTE8 343 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 LYSMD3Q7Z3D4 306 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PIGWQ7Z7B1 504 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CHST14Q8NCH0 376 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 OR6P1Q8NGX9 317 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PDCD6IPQ8WUM4 868 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SUSD6Q92537 303 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 NXPE3Q969Y0 559 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SCRN2Q96FV2 425 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ATXN7L3BQ96GX2 97 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 LRIG1Q96JA1 1093 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TCF12Q99081 682 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 OMDQ99983 421 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SLC13A1Q9BZW2 595 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 IQCGQ9H095 443 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TTYH1Q9H313 450 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 POMKQ9H5K3 350 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ELOVL2Q9NXB9 296 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SIRPGQ9P1W8 387 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 EPS15L1Q9UBC2 864 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TTC34A8MYJ7 566 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 NDUFAB1O14561 156 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CTPS1P17812 591 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CRABP2P29373 138 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 HNF1BP35680 557 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PTPN5P54829 565 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TMPRSS15P98073 1019 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 RAD51Q06609 339 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CCDC153Q494R4 210 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 RBM20Q5T481 1227 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 N4BP2L1Q5TBK1 243 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CGB2Q6NT52 195 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CHRDL2Q6WN34 429 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SLC41A1Q8IVJ1 513 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CEP97Q8IW35 865 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PLD6Q8N2A8 252 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CBARPQ8N350 705 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SMRP1Q8NCR6 262 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CYB5D2Q8WUJ1 264 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SORCS1Q8WY21 1168 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ZNF75CPQ92670 426 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 RMDN2Q96LZ7 410 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 HEPHQ9BQS7 1158 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 OSBPL1AQ9BXW6 950 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ZDHHC6Q9H6R6 413 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 POPDC3Q9HBV1 291 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 DEC1Q9P2X7 70 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 DKK3Q9UBP4 350 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 FKBPLQ9UIM3 349 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SLC39A10Q9ULF5 831 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 A0A087X1B8 175 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TRBV5-4A0A0C4DH59 114 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 NPIPB15A6NHN6 443 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ANHXE9PGG2 379 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 STX7O15400 261 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 EDF1O60869 148 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CTSLP07711 333 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 BPGMP07738 259 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 STMN1P16949 149 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CD9P21926 228 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 FDXRP22570 491 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 GJA4P35212 333 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 NNMTP40261 264 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ADARP55265 1226 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TAS2R39P59534 338 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 IRF9Q00978 393 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TIAL1Q01085 375 aaKnown RBP eCLIP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 USP10Q14694 798 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PCLAFQ15004 111 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 SEPT7Q16181 437 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ACCSLQ4AC99 568 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 FASTKD1Q53R41 847 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 FAM45BPQ6NSW5 357 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ZNF549Q6P9A3 640 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 BRAT1Q6PJG6 821 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 PARM1Q6UWI2 310 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 GDPD4Q6W3E5 623 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 DNAJC14Q6Y2X3 702 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TPRG1Q6ZUI0 275 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 CENPLQ8N0S6 344 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 RYBPQ8N488 228 aaPredicted RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TMEM151AQ8N4L1 468 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TERB1Q8NA31 727 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ARMC2Q8NEN0 867 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 OR6Y1Q8NGX8 325 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 FAM45AQ8TCE6 357 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 LRRC8CQ8TDW0 803 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 MYLIPQ8WY64 445 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 LPGAT1Q92604 370 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 FGF14Q92915 247 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TSPAN17Q96FV3 270 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 NECTIN4Q96NY8 510 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 GPR78Q96P69 363 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 OLFM1Q99784 485 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 NSRP1Q9H0G5 558 aaKnown RBP5.51□□□□□ -1.53
EPHA4-202ENST00000409854 TMEM245Q9H330 911 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 ZFYVE1Q9HBF4 777 aa5.51□□□□□ -1.53
EPHA4-202ENST00000409854 UTP6Q9NYH9 597 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms