RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TDRD3Q9H7E2 651 aaKnown RBP4.58□□□□□ -1.68
CLK1-203ENST00000409769 PPCSQ9HAB8 311 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 MCM9Q9NXL9 1143 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 DNAJC16Q9Y2G8 782 aa4.58□□□□□ -1.68
CLK1-203ENST00000409769 PLIN4Q96Q06 1357 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 OTOFQ9HC10 1997 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 MYH6P13533 1939 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 GLTPD2A6NH11 291 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 DDTLA6NHG4 134 aaPredicted RBP4.57□□□□□ -1.68
CLK1-203ENST00000409769 TPD52L2O43399 206 aaKnown RBP4.57□□□□□ -1.68
CLK1-203ENST00000409769 TSPAN3O60637 253 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 DDAH2O95865 285 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 MYZAPP0CAP1 466 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 FCGR2AP12318 317 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 CPA1P15085 419 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 EPS15P42566 896 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 CCT5P48643 541 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 NOVP48745 357 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 EVCP57679 992 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 ANKRD1Q15327 319 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 RUNDC3AQ59EK9 446 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 BLOC1S2Q6QNY1 142 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 PARM1Q6UWI2 310 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 MFSD6Q6ZSS7 791 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 BBS12Q6ZW61 710 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 VPS52Q8N1B4 723 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 FBXL14Q8N1E6 418 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 IQCF1Q8N6M8 205 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 FAM151AQ8WW52 585 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 DYNLL2Q96FJ2 89 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 PYM1Q9BRP8 204 aaKnown RBP4.57□□□□□ -1.68
CLK1-203ENST00000409769 UPF3BQ9BZI7 483 aaKnown RBP4.57□□□□□ -1.68
CLK1-203ENST00000409769 KRT23Q9C075 422 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 RNF41Q9H4P4 317 aaPredicted RBP4.57□□□□□ -1.68
CLK1-203ENST00000409769 DNAJC18Q9H819 358 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 RMI1Q9H9A7 625 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 TXLNGQ9NUQ3 528 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 UPB1Q9UBR1 384 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 CLDN16Q9Y5I7 305 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 DGKBQ9Y6T7 804 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 DOCK1Q14185 1865 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 PHIPQ8WWQ0 1821 aa4.57□□□□□ -1.68
CLK1-203ENST00000409769 PTPRFP10586 1907 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 ASTN2O75129 1339 aaPredicted RBP4.56□□□□□ -1.68
CLK1-203ENST00000409769 CLRN2A0PK11 232 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 TCP10L2B9ZVM9 353 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 STX16-NPEPL1H3BU86 382 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 SH2B2O14492 632 aaPredicted RBP4.56□□□□□ -1.68
CLK1-203ENST00000409769 STX16O14662 325 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 ACOT8O14734 319 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 SYN3O14994 580 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 KIF1CO43896 1103 aaKnown RBP4.56□□□□□ -1.68
CLK1-203ENST00000409769 DHX16O60231 1041 aaKnown RBP4.56□□□□□ -1.68
CLK1-203ENST00000409769 SHMT1P34896 483 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 ANP32AP39687 249 aaKnown RBP4.56□□□□□ -1.68
CLK1-203ENST00000409769 MTNR1AP48039 350 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 ARHGAP8P85298 464 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 GAD2Q05329 585 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 ST3GAL1Q11201 340 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 TCP10Q12799 353 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 PTGR1Q14914 329 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 MAP3K21Q5TCX8 1036 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 TATDN1Q6P1N9 297 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 GJB7Q6PEY0 223 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 SYNE3Q6ZMZ3 975 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 RNF144BQ7Z419 303 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 CCDC25Q86WR0 208 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 GPSM1Q86YR5 675 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 FOXP4Q8IVH2 680 aaPredicted RBP4.56□□□□□ -1.68
CLK1-203ENST00000409769 TMEM199Q8N511 208 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 FAR1Q8WVX9 515 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 HERVK_113Q902F9 699 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 LPAR1Q92633 364 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 TRIM63Q969Q1 353 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 ZNF333Q96JL9 665 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 TCEANC2Q96MN5 208 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 TWNKQ96RR1 684 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 SF3B5Q9BWJ5 86 aaKnown RBP4.56□□□□□ -1.68
CLK1-203ENST00000409769 RBM38Q9H0Z9 239 aaKnown RBP4.56□□□□□ -1.68
CLK1-203ENST00000409769 PDRG1Q9NUG6 133 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 TCP11L1Q9NUJ3 509 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 GRHL1Q9NZI5 618 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 SWAP70Q9UH65 585 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 HACL1Q9UJ83 578 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 CYP46A1Q9Y6A2 500 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 SSC5DA1L4H1 1573 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 TRPM7Q96QT4 1865 aa4.56□□□□□ -1.68
CLK1-203ENST00000409769 BAZ2BQ9UIF8 2168 aaKnown RBP4.55□□□□□ -1.68
CLK1-203ENST00000409769 NID2Q14112 1375 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 NOTCH4Q99466 2003 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 IGKV6D-41A0A0C4DH26 115 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 C17orf102A2RUQ5 167 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 PRDM1O75626 825 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 TMCC1O94876 653 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 UNGP13051 313 aaPredicted RBP4.55□□□□□ -1.68
CLK1-203ENST00000409769 HOXB2P14652 356 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 KLRC2P26717 231 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 TNFSF8P32971 234 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 EPHX2P34913 555 aa4.55□□□□□ -1.68
CLK1-203ENST00000409769 LIFRP42702 1097 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms