RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 GJC1P36383 396 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 IFI35P80217 286 aaPredicted RBP14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 PTSQ03393 145 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 EIF3IQ13347 325 aaKnown RBP14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 TFDP2Q14188 446 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 TBC1D25Q3MII6 688 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 TAF8Q7Z7C8 310 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 RNF214Q8ND24 703 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 GPR156Q8NFN8 814 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 ARRDC2Q8TBH0 407 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 KIAA1524Q8TCG1 905 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 RAPGEF5Q92565 580 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 SRPK1Q96SB4 655 aaKnown RBP14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 CCDC3Q9BQI4 270 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 TDRD1Q9BXT4 1180 aaKnown RBP14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 GSDMCQ9BYG8 508 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 GULP1Q9UBP9 304 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 PCDHGA8Q9Y5G5 932 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 PRSS38A1L453 326 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 NPIPB15A6NHN6 443 aaPredicted RBP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 ANKRD66B4E2M5 251 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 NTN3O00634 580 aaPredicted RBP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 APOL1O14791 398 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 PPP1R12AO14974 1030 aaPredicted RBP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 NUDT21O43809 227 aaKnown RBP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 BRINP1O60477 761 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 LCA5LO95447 670 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 PDHA1P08559 390 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 MYF5P13349 255 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 ETV3P41162 512 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 MAGEA1P43355 309 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 GBE1Q04446 702 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 ILF3Q12906 894 aaKnown RBP eCLIP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 SLC10A2Q12908 348 aaPredicted RBP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 SPIDRQ14159 915 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 SLC14A2Q15849 920 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 CLPPQ16740 277 aaPredicted RBP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 CRTC1Q6UUV9 634 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 ADAMTSL4Q6UY14 1074 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 Q6ZVL8 140 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 HSD11B1LQ7Z5J1 315 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 ZNF248Q8NDW4 579 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 FAM46DQ8NEK8 389 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 EXD1Q8NHP7 514 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 CCHCR1Q8TD31 782 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 GPBAR1Q8TDU6 330 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 HNRNPLLQ8WVV9 542 aaKnown RBP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 OR1E3Q8WZA6 343 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 CCDC97Q96F63 343 aaPredicted RBP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 SCARF2Q96GP6 870 aaPredicted RBP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 LGR4Q9BXB1 951 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 CDH19Q9H159 772 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 PCDH9Q9HC56 1237 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 CYP4F12Q9HCS2 524 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 FGF22Q9HCT0 170 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 SPTLC3Q9NUV7 552 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 SLC17A4Q9Y2C5 497 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 LAMA5O15230 3695 aa14.51□□□□□ -0.09
NIF3L1-205ENST00000409588 APC2O95996 2303 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 C3orf70A6NLC5 250 aaPredicted RBP14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 JCHAINP01591 159 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 CEACAM5P06731 702 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 IVLP07476 585 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 LHCGRP22888 699 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 RBMS1P29558 406 aaKnown RBP14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 ABCG1P45844 678 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 GPR1P46091 355 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 CLDN6P56747 220 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 CDK3Q00526 305 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 SPA17Q15506 151 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 LRRC66Q68CR7 880 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 DENND2CQ68D51 928 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 HEATR4Q86WZ0 1026 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 ARL14Q8N4G2 192 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 PLD5Q8N7P1 536 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 WDR36Q8NI36 951 aaKnown RBP14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 TMEM159Q96B96 161 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 AP2M1Q96CW1 435 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 PDXPQ96GD0 296 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 SLC46A1Q96NT5 459 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 MLPHQ9BV36 600 aaPredicted RBP14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 FRMD8Q9BZ67 464 aaPredicted RBP14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 DPH1Q9BZG8 443 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 STRADBQ9C0K7 418 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 TMEM168Q9H0V1 697 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 THSD1Q9NS62 852 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 RAD18Q9NS91 495 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 HEY1Q9Y5J3 304 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 ANKRD36A6QL64 1941 aa14.5□□□□□ -0.09
NIF3L1-205ENST00000409588 LRRK1Q38SD2 2015 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 MYLKQ15746 1914 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 A0A0A6YYK5 440 aaPredicted RBP14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 CAPN8A6NHC0 703 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 MTSS1O43312 755 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 PSTPIP1O43586 416 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 SPOPO43791 374 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 PRLP01236 227 aa14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 CYLC1P35663 651 aaPredicted RBP14.49□□□□□ -0.09
NIF3L1-205ENST00000409588 UCNP55089 124 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms