RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 MSANTD2Q6P1R3 559 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 DHFR2Q86XF0 187 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 DNAJB14Q8TBM8 379 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 GPR21Q99679 349 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 PKP2Q99959 881 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 VPS28Q9UK41 221 aa11.9□□□□□ -0.51
PCNX4-204ENST00000406949 ZFP37Q9Y6Q3 630 aaPredicted RBP11.9□□□□□ -0.51
PCNX4-204ENST00000406949 NPEPPSL1A6NEC2 478 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 PPP6CO00743 305 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 AZIN1O14977 448 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 VPS26AO75436 327 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 TIPRLO75663 272 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 RPP40O75818 363 aaKnown RBP11.89□□□□□ -0.51
PCNX4-204ENST00000406949 PSMC3P17980 439 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 HLA-DPA1P20036 260 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 OR1D2P34982 312 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 ALDH7A1P49419 539 aaKnown RBP11.89□□□□□ -0.51
PCNX4-204ENST00000406949 HK2P52789 917 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 TPD52P55327 224 aaPredicted RBP11.89□□□□□ -0.51
PCNX4-204ENST00000406949 PLD1Q13393 1074 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 NFYCQ13952 458 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 C6orf10Q5SRN2 563 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 IL23RQ5VWK5 629 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 ANKS6Q68DC2 871 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 KDELC1Q6UW63 502 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 LCA5Q86VQ0 697 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 CIB1Q99828 191 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 IGSF5Q9NSI5 407 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 A0A0J9YYE9 177 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 PRRG1O14668 218 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 CTPS1P17812 591 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 KCNK10P57789 538 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 INHBEP58166 350 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 MTX3Q5HYI7 312 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 PTRHD1Q6GMV3 140 aaKnown RBP11.89□□□□□ -0.51
PCNX4-204ENST00000406949 PGM2L1Q6PCE3 622 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 PAQR3Q6TCH7 311 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 RNF19BQ6ZMZ0 732 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 ZBTB49Q6ZSB9 765 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 CLYBLQ8N0X4 340 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 MIER2Q8N344 545 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 SPPL2BQ8TCT7 592 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 TWIST2Q8WVJ9 160 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 LRTOMTQ8WZ04 291 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCNX4-204ENST00000406949 ISL2Q96A47 359 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 SLC45A3Q96JT2 553 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 SYTL2Q9HCH5 934 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 TREX1Q9NSU2 369 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 TNFRSF10BO14763 440 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 MAP3K13O43283 966 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 PQBP1O60828 265 aaKnown RBP11.89□□□□□ -0.51
PCNX4-204ENST00000406949 CTGFP29279 349 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 ADRA1AP35348 466 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 IL10RBQ08334 325 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 FOXD4Q12950 439 aaPredicted RBP11.89□□□□□ -0.51
PCNX4-204ENST00000406949 LAMB3Q13751 1172 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 PARP15Q460N3 678 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 SAPCD2Q86UD0 394 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 UMODL1-AS1Q8N2C9 162 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 OR13J1Q8NGT2 312 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 FUBP3Q96I24 572 aaKnown RBP eCLIP11.89□□□□□ -0.512e-8■■■□□ 18.3
PCNX4-204ENST00000406949 HACD3Q9P035 362 aa11.89□□□□□ -0.51
PCNX4-204ENST00000406949 INPP4BO15327 924 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 POLD2P49005 469 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 CCL23P55773 120 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 GNA12Q03113 381 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 ADGRE1Q14246 886 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 SAMD4BQ5PRF9 694 aaKnown RBP11.88□□□□□ -0.51
PCNX4-204ENST00000406949 TBCELQ5QJ74 424 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 FUT10Q6P4F1 479 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 SATL1Q86VE3 508 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 CDYL2Q8N8U2 506 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 PHC3Q8NDX5 983 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 FAM210AQ96ND0 272 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 TMEM79Q9BSE2 394 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 HGH1Q9BTY7 390 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 MFSD1Q9H3U5 465 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 NOL6Q9H6R4 1146 aaKnown RBP11.88□□□□□ -0.51
PCNX4-204ENST00000406949 NOL11Q9H8H0 719 aaKnown RBP11.88□□□□□ -0.51
PCNX4-204ENST00000406949 LATS2Q9NRM7 1088 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCNX4-204ENST00000406949 TMEM248Q9NWD8 314 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 DNMT3LQ9UJW3 386 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 NDUFAF1Q9Y375 327 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 FAM149AA5PLN7 773 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 CLASP2O75122 1294 aaKnown RBP11.88□□□□□ -0.51
PCNX4-204ENST00000406949 NDST3O95803 873 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 S1PR4O95977 384 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 MT-ND1P03886 318 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 IL10P22301 178 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 CES1P23141 567 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 LEPRP48357 1165 aaKnown RBP11.88□□□□□ -0.51
PCNX4-204ENST00000406949 RHOAP61586 193 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 LIN52Q52LA3 116 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 RNF219Q5W0B1 726 aaPredicted RBP11.88□□□□□ -0.51
PCNX4-204ENST00000406949 KBTBD6Q86V97 674 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 MYO1HQ8N1T3 1032 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 STAG3L4Q8TBR4 150 aa11.88□□□□□ -0.51
PCNX4-204ENST00000406949 CYGBQ8WWM9 190 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms