RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ALDOAP04075 364 aaKnown RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 PRNPP04156 253 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 IL9P15248 144 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 HADHAP40939 763 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 CD151P48509 253 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 PSMD8P48556 350 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 LIMK2P53671 638 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 IRX4P78413 519 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 FRG1Q14331 258 aaKnown RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 USP10Q14694 798 aaKnown RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 ZNF805Q5CZA5 627 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 ZNF449Q6P9G9 518 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 FBXL19Q6PCT2 694 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 AFTPHQ6ULP2 937 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 TPRG1Q6ZUI0 275 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 SDCCAG8Q86SQ7 713 aaPredicted RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 ZC3HC1Q86WB0 502 aaKnown RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 PLPP6Q8IY26 295 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 TTC30BQ8N4P2 665 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 C2CD4AQ8NCU7 369 aaPredicted RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 PIP4K2CQ8TBX8 421 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 NAT14Q8WUY8 206 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 MTBPQ96DY7 904 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 ELMO2Q96JJ3 720 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 OSBPL1AQ9BXW6 950 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 TMEM245Q9H330 911 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 CNOT10Q9H9A5 744 aaKnown RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 PCDH12Q9NPG4 1184 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 PRDM6Q9NQX0 595 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 DYRK4Q9NR20 520 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 INTS9Q9NV88 658 aaKnown RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 NSMCE4AQ9NXX6 385 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 IL17CQ9P0M4 197 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 THAP10Q9P2Z0 257 aaPredicted RBP3.71□□□□□ -1.82
RTN4-208ENST00000404909 ITM2BQ9Y287 266 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 ACTL7BQ9Y614 415 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 STON1Q9Y6Q2 735 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 DNAH14Q0VDD8 3507 aa3.71□□□□□ -1.82
RTN4-208ENST00000404909 MYLKQ15746 1914 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 KIF26AQ9ULI4 1882 aaPredicted RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 WDR91A4D1P6 747 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 UPK3BL1B0FP48 263 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 UPK3BL2E5RIL1 263 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 PHGDHO43175 533 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 RRP9O43818 475 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 DNAJC6O75061 913 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 NDUFS3O75489 264 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 RFPL1O75677 317 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 PRAMEF1O95521 474 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 EGFP01133 1207 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 TIMP2P16035 220 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 UGT1A6P19224 532 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 UGT1A1P22309 533 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 UGT1A4P22310 534 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 LHCGRP22888 699 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 CNTFP26441 200 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 UGT1A3P35503 534 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 UGT1A5P35504 534 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 MDH1P40925 334 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 SLC12A2P55011 1212 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 CSE1LP55060 971 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 GNGT1P63211 74 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 PTSQ03393 145 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 GRSF1Q12849 480 aaKnown RBP eCLIP3.7□□□□□ -1.82
RTN4-208ENST00000404909 SEMA3AQ14563 771 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 ZNF460Q14592 562 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 SMAD2Q15796 467 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 PSAPL1Q6NUJ1 521 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 RFLNAQ6ZTI6 216 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 PARS2Q7L3T8 475 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 SLC41A1Q8IVJ1 513 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 SPNS2Q8IVW8 549 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 CNTN4Q8IWV2 1026 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 PIANPQ8IYJ0 282 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 CCDC63Q8NA47 563 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 TCP10LQ8TDR4 215 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 EZH1Q92800 747 aaPredicted RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 PEX13Q92968 403 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 WRAP53Q9BUR4 548 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 UNKQ9C0B0 810 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 FAM107BQ9H098 131 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 RHOJQ9H4E5 214 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 PRSS16Q9NQE7 514 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 SNX15Q9NRS6 342 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 SUN2Q9UH99 717 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 PPM1HQ9ULR3 514 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 NDRG2Q9UN36 371 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 SMG5Q9UPR3 1016 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 SLC30A1Q9Y6M5 507 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 SDK1Q7Z5N4 2213 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 FAM95CA0A1B0GW59 222 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 OR1I1O60431 355 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 CYP2A6P11509 494 aaPredicted RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 BPIP17213 487 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 CCT5P48643 541 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 ACVR1Q04771 509 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 PEX6Q13608 980 aa3.7□□□□□ -1.82
RTN4-208ENST00000404909 PDE1CQ14123 709 aaPredicted RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 RBM20Q5T481 1227 aaKnown RBP3.7□□□□□ -1.82
RTN4-208ENST00000404909 HHATQ5VTY9 493 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms