RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TAF1AQ15573 450 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-204ENST00000401473 SPDYCQ5MJ68 293 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 ZDHHC24Q6UX98 284 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 C1orf216Q8TAB5 229 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 FBXO25Q8TCJ0 367 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 DNASE2BQ8WZ79 361 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 ART4Q93070 314 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 SCAMP4Q969E2 229 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 IRF2BPLQ9H1B7 796 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 MBNL1Q9NR56 388 aaKnown RBP15.93■□□□□ 0.14
HMGA1-204ENST00000401473 CHRAC1Q9NRG0 131 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 TMEM74BQ9NUR3 256 aa15.93■□□□□ 0.14
HMGA1-204ENST00000401473 EIF2B4Q9UI10 523 aaKnown RBP15.93■□□□□ 0.14
HMGA1-204ENST00000401473 TNRC6BQ9UPQ9 1833 aaKnown RBP15.92■□□□□ 0.14
HMGA1-204ENST00000401473 A0A1W2PPC4 97 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 MROH6A6NGR9 719 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 PSMD11O00231 422 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 BANF1O75531 89 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 SLU7O95391 586 aaKnown RBP15.92■□□□□ 0.14
HMGA1-204ENST00000401473 PLTPP55058 493 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 SGCGQ13326 291 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 AGERQ15109 404 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 WSCD2Q2TBF2 565 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 MICALCLQ6ZW33 695 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 GPR26Q8NDV2 337 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 OR13C4Q8NGS5 318 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 FOXJ1Q92949 421 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 SIGLEC10Q96LC7 697 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 SRPK1Q96SB4 655 aaKnown RBP15.92■□□□□ 0.14
HMGA1-204ENST00000401473 TRIM56Q9BRZ2 755 aaKnown RBP15.92■□□□□ 0.14
HMGA1-204ENST00000401473 CA5BQ9Y2D0 317 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 DMXL1Q9Y485 3027 aa15.92■□□□□ 0.14
HMGA1-204ENST00000401473 CCDC78A2IDD5 438 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 K7ESM1 405 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 BPIP17213 487 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 NPY2RP49146 381 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 DHPSP49366 369 aaPredicted RBP15.91■□□□□ 0.14
HMGA1-204ENST00000401473 CALCOCO2Q13137 446 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 C11orf74Q86VG3 221 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 TP53I13Q8NBR0 393 aaPredicted RBP15.91■□□□□ 0.14
HMGA1-204ENST00000401473 OR4K2Q8NGD2 314 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 ASB12Q8WXK4 309 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 SNX19Q92543 992 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 DTD2Q96FN9 168 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 MYOCQ99972 504 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 IL22Q9GZX6 179 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 XAB2Q9HCS7 855 aaKnown RBP15.91■□□□□ 0.14
HMGA1-204ENST00000401473 SYBUQ9NX95 663 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 BFARQ9NZS9 450 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 POM121BA6NF01 834 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 C2orf81A6NN90 581 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 H0Y8X5 98 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 CRTAMO95727 393 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 LPOP22079 712 aaPredicted RBP15.91■□□□□ 0.14
HMGA1-204ENST00000401473 ADRA1DP25100 572 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 CD27P26842 260 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 TEX35Q5T0J7 233 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 TMEM145Q8NBT3 493 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 PLA2G15Q8NCC3 412 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 BBOF1Q8ND07 529 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 FUBP1Q96AE4 644 aaKnown RBP15.91■□□□□ 0.14
HMGA1-204ENST00000401473 BMFQ96LC9 184 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 LENG8Q96PV6 779 aaPredicted RBP15.91■□□□□ 0.14
HMGA1-204ENST00000401473 AGAP2Q99490 1192 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 ABCG8Q9H221 673 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 ZDHHC18Q9NUE0 388 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 SLC2A6Q9UGQ3 507 aa15.91■□□□□ 0.14
HMGA1-204ENST00000401473 SMG5Q9UPR3 1016 aaKnown RBP15.91■□□□□ 0.14
HMGA1-204ENST00000401473 GVINP1Q7Z2Y8 2422 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 RALGAPA1Q6GYQ0 2036 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 SDR42E2A6NKP2 422 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 SMAPO00193 183 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 AP3B1O00203 1094 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 CCL22O00626 93 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 CARSP49589 748 aaKnown RBP15.9■□□□□ 0.14
HMGA1-204ENST00000401473 ZNF140P52738 457 aaPredicted RBP15.9■□□□□ 0.14
HMGA1-204ENST00000401473 CLDN2P57739 230 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 DHX9Q08211 1270 aaKnown RBP15.9■□□□□ 0.14
HMGA1-204ENST00000401473 SEPT6Q14141 434 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 LRRC14Q15048 493 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 ELF2Q15723 593 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 SETMARQ53H47 684 aaPredicted RBP15.9■□□□□ 0.14
HMGA1-204ENST00000401473 PCID2Q5JVF3 399 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 HP1BP3Q5SSJ5 553 aaPredicted RBP15.9■□□□□ 0.14
HMGA1-204ENST00000401473 CES3Q6UWW8 571 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 CYP2U1Q7Z449 544 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 IGDCC3Q8IVU1 814 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 RGL4Q8IZJ4 473 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 SERAC1Q96JX3 654 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 RANBP9Q96S59 729 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 WDR83Q9BRX9 315 aaKnown RBP15.9■□□□□ 0.14
HMGA1-204ENST00000401473 IL26Q9NPH9 171 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 GDF3Q9NR23 364 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 TCAF1Q9Y4C2 921 aa15.9■□□□□ 0.14
HMGA1-204ENST00000401473 PTPRZ1P23471 2315 aaPredicted RBP15.89■□□□□ 0.13
HMGA1-204ENST00000401473 MEI4A8MW99 385 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 GAPDHSO14556 408 aaPredicted RBP15.89■□□□□ 0.13
HMGA1-204ENST00000401473 RHOBTB1O94844 696 aa15.89■□□□□ 0.13
HMGA1-204ENST00000401473 HNRNPA2B1P22626 353 aaKnown RBP15.89■□□□□ 0.13
HMGA1-204ENST00000401473 ECHS1P30084 290 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms