RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 PGBD5Q8N414 524 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 FNIP1Q8TF40 1166 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 SEMA3CQ99985 751 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 TEX101Q9BY14 249 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 GSDMCQ9BYG8 508 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 SLC25A18Q9H1K4 315 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 PHPT1Q9NRX4 125 aaPredicted RBP11.91□□□□□ -0.5
LINC00544-201ENST00000400540 GOLGA6AQ9NYA3 693 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 B3GALT1Q9Y5Z6 326 aa11.91□□□□□ -0.5
LINC00544-201ENST00000400540 NPIPB15A6NHN6 443 aaPredicted RBP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 LGALS16A8MUM7 142 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 HGSO14964 777 aaPredicted RBP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 HTRA2O43464 458 aaPredicted RBP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 PEX11BO96011 259 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 THRAP10827 490 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 CR2P20023 1033 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 UGT1A3P35503 534 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 LIMK2P53671 638 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 MAXP61244 160 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 CTBSQ01459 385 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 SRSF1Q07955 248 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 TRAF2Q12933 501 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 MAMLD1Q13495 774 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 DPYSQ14117 519 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 RFTN1Q14699 578 aaPredicted RBP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 CT47A1Q5JQC4 288 aaPredicted RBP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 TMCO4Q5TGY1 634 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 TMEM164Q5U3C3 297 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 RAET1GQ6H3X3 334 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 ZNF761Q86XN6 746 aaPredicted RBP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 ART4Q93070 314 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 DTD2Q96FN9 168 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 SMIM14Q96QK8 99 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 PSKH2Q96QS6 385 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 TAAR9Q96RI9 348 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 SYT11Q9BT88 431 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 ETNK2Q9NVF9 386 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 GEMIN8Q9NWZ8 242 aaKnown RBP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 TRNAU1APQ9NX07 287 aaKnown RBP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 OCIAD1Q9NX40 245 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 DONSONQ9NYP3 566 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 CWC15Q9P013 229 aaKnown RBP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 AKAP7Q9P0M2 348 aaPredicted RBP11.9□□□□□ -0.5
LINC00544-201ENST00000400540 SEPT3Q9UH03 358 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 CD84Q9UIB8 345 aa11.9□□□□□ -0.5
LINC00544-201ENST00000400540 IGHV1OR21-1A0A087WYE8 117 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 PDE2AO00408 941 aaPredicted RBP11.89□□□□□ -0.51
LINC00544-201ENST00000400540 SOD1P00441 154 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 SFTPCP11686 197 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 CTPS1P17812 591 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 MIPP30301 263 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 ADCY8P40145 1251 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 ACTR1BP42025 376 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 ATP1A2P50993 1020 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 POLE2P56282 527 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 ACTR1AP61163 376 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 UBXN1Q04323 297 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 BIRC2Q13490 618 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 ZNF235Q14590 738 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 SKIDA1Q1XH10 827 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 PLEKHA7Q6IQ23 1121 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 BORAQ6PGQ7 559 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 Q6ZVL8 140 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 TRIM74Q86UV6 250 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 CBARPQ8N350 705 aaPredicted RBP11.89□□□□□ -0.51
LINC00544-201ENST00000400540 IL22RA1Q8N6P7 574 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 OR4D9Q8NGE8 314 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 B3GNT4Q9C0J1 378 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 EPN3Q9H201 632 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 NOD2Q9HC29 1040 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 LIMA1Q9UHB6 759 aaKnown RBP11.89□□□□□ -0.51
LINC00544-201ENST00000400540 SLC17A4Q9Y2C5 497 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 PCDHGA3Q9Y5H0 932 aa11.89□□□□□ -0.51
LINC00544-201ENST00000400540 TRBV23OR9-2A0A075B6M9 112 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.88□□□□□ -0.51
LINC00544-201ENST00000400540 TMEM191CA6NGB0 347 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 EIF3CLB5ME19 914 aaKnown RBP11.88□□□□□ -0.51
LINC00544-201ENST00000400540 SOCS5O75159 536 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 LRCH4O75427 683 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 EML2O95834 649 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 IVLP07476 585 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 TCF4P15884 667 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 DESP17661 470 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 GPR3P46089 330 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 RENBPP51606 427 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 KCNAB2Q13303 367 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 SMTNL2Q2TAL5 461 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 ANKS6Q68DC2 871 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 MARK2Q7KZI7 788 aaKnown RBP11.88□□□□□ -0.51
LINC00544-201ENST00000400540 APTXQ7Z2E3 356 aaKnown RBP11.88□□□□□ -0.51
LINC00544-201ENST00000400540 IRF2BP2Q7Z5L9 587 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 FAM129CQ86XR2 697 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 CACNA2D3Q8IZS8 1091 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 BMPERQ8N8U9 685 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 ZNF564Q8TBZ8 553 aaPredicted RBP11.88□□□□□ -0.51
LINC00544-201ENST00000400540 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 ERGIC2Q96RQ1 377 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 NUDCD1Q96RS6 583 aa11.88□□□□□ -0.51
LINC00544-201ENST00000400540 EIF3CQ99613 913 aaKnown RBP11.88□□□□□ -0.51
LINC00544-201ENST00000400540 MGME1Q9BQP7 344 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms