RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 GFAPP14136 432 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 THPOP40225 353 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 POLD2P49005 469 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 TIAL1Q01085 375 aaKnown RBP eCLIP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 ZNF33AQ06730 810 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 ANKRD23Q86SG2 305 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 CALML6Q8TD86 181 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 PBXIP1Q96AQ6 731 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 IKZF3Q9UKT9 509 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 TNFRSF10BO14763 440 aa19.52■□□□□ 0.72
COL13A1-205ENST00000398978 CAPNS1P04632 268 aa19.52■□□□□ 0.72
COL13A1-205ENST00000398978 PRDX3P30048 256 aaKnown RBP19.52■□□□□ 0.72
COL13A1-205ENST00000398978 HOXC13P31276 330 aa19.52■□□□□ 0.72
COL13A1-205ENST00000398978 TSPY1Q01534 308 aa19.52■□□□□ 0.72
COL13A1-205ENST00000398978 PABPC1LQ4VXU2 614 aaKnown RBP19.52■□□□□ 0.72
COL13A1-205ENST00000398978 CARM1Q86X55 608 aa19.52■□□□□ 0.72
COL13A1-205ENST00000398978 FAR2Q96K12 515 aa19.52■□□□□ 0.72
COL13A1-205ENST00000398978 SEMA3CQ99985 751 aa19.52■□□□□ 0.72
COL13A1-205ENST00000398978 CCDC162PA2VCL2 907 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 LDB2O43679 373 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 H6PDO95479 791 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 CDK4P11802 303 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 CD1DP15813 335 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 RABL3Q5HYI8 236 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 KIAA0408Q6ZU52 694 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 ZNF786Q8N393 782 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 KLHDC9Q8NEP7 349 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 CCDC126Q96EE4 140 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 TSPAN17Q96FV3 270 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 TEX37Q96LM6 180 aa19.52■□□□□ 0.71
COL13A1-205ENST00000398978 HGFP14210 728 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 CYP2C18P33260 490 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 RENBPP51606 427 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 ARPP19P56211 112 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 OFCC1Q8IZS5 231 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 OR2T34Q8NGX1 318 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 OR2T3Q8NH03 318 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 ZC3H15Q8WU90 426 aaKnown RBP19.51■□□□□ 0.71
COL13A1-205ENST00000398978 MUC3BQ9H195 1237 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 VPS45Q9NRW7 570 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 SLAMF8Q9P0V8 285 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 GMIPQ9P107 970 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 SARDHQ9UL12 918 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 TRMUO75648 421 aaKnown RBP19.51■□□□□ 0.71
COL13A1-205ENST00000398978 SLC2A3P11169 496 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 HERVK_113P63132 956 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 PTPRRQ15256 657 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 RPS6KA2Q15349 733 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 MS4A13Q5J8X5 152 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 AFMIDQ63HM1 303 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 EPHX4Q8IUS5 362 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 SLC22A9Q8IVM8 553 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 SLC15A3Q8IY34 581 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 CFAP52Q8N1V2 620 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 RMND5BQ96G75 393 aaPredicted RBP19.51■□□□□ 0.71
COL13A1-205ENST00000398978 EXOC2Q96KP1 924 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 ADAM2Q99965 735 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 OSBPL11Q9BXB4 747 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 ERVK-6Q9BXR3 956 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 UPF3AQ9H1J1 476 aaKnown RBP19.51■□□□□ 0.71
COL13A1-205ENST00000398978 CMTM6Q9NX76 183 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 GIT1Q9Y2X7 761 aa19.51■□□□□ 0.71
COL13A1-205ENST00000398978 ZFC3H1O60293 1989 aaKnown RBP19.51■□□□□ 0.71
COL13A1-205ENST00000398978 ENPP3O14638 875 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 BAIAP3O94812 1187 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 GALK1P51570 392 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 PLIN5Q00G26 463 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 MORN1Q5T089 497 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 LPCAT2Q7L5N7 544 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 ZBTB46Q86UZ6 589 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 CLYBLQ8N0X4 340 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 FIBCD1Q8N539 461 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 C1orf50Q9BV19 199 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 SMOXQ9NWM0 555 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 RHBDL2Q9NX52 303 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 MYRFQ9Y2G1 1151 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 H3BNH8 94 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 ANGPT2O15123 496 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 FAM163BP0C2L3 166 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 ATXN1LP0C7T5 689 aaKnown RBP19.5■□□□□ 0.71
COL13A1-205ENST00000398978 RPL9P32969 192 aaKnown RBP19.5■□□□□ 0.71
COL13A1-205ENST00000398978 AGTR2P50052 363 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 TAF2Q6P1X5 1199 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 FAM43BQ6ZT52 329 aaPredicted RBP19.5■□□□□ 0.71
COL13A1-205ENST00000398978 FBXL20Q96IG2 436 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 TMEM74Q96NL1 305 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 HBEGFQ99075 208 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.5■□□□□ 0.71
COL13A1-205ENST00000398978 PRG3Q9Y2Y8 225 aaPredicted RBP19.5■□□□□ 0.71
COL13A1-205ENST00000398978 SUPT3HB4E1H0 165 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 SUPT3HO75486 399 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 MTHFD2P13995 350 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 DNAJB1P25685 340 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 FMO4P31512 558 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 PSMD8P48556 350 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 CDKN1CP49918 316 aaPredicted RBP19.5■□□□□ 0.71
COL13A1-205ENST00000398978 TBX4P57082 545 aa19.5■□□□□ 0.71
COL13A1-205ENST00000398978 TXNL4AP83876 142 aaKnown RBP19.5■□□□□ 0.71
COL13A1-205ENST00000398978 YWHAHQ04917 246 aaPredicted RBP19.5■□□□□ 0.71
COL13A1-205ENST00000398978 FBXL22Q6P050 247 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms