RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 HSPA4LO95757 839 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 TARSP26639 723 aaKnown RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ALDH18A1P54886 795 aaKnown RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 IFT43Q96FT9 208 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 VCXQ9H320 206 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF385DQ9H6B1 395 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 PKP3Q9Y446 797 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 SLC30A1Q9Y6M5 507 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 TMEM265A0A087WTH1 108 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 TCRBV7S3A2A0A539 114 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 TBKBP1A7MCY6 615 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 FAM72CH0Y354 149 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF195O14628 629 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ATP9BO43861 1147 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 CIB2O75838 187 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 PIM1P11309 404 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 CREB1P16220 341 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 HSD17B2P37059 387 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 AFF1P51825 1210 aaKnown RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ELP6Q0PNE2 266 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 FAM72AQ5TYM5 149 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 FAM72DQ6L9T8 149 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 GDPD4Q6W3E5 623 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 SNX20Q7Z614 316 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 UBE2Q1Q7Z7E8 422 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 FAM72BQ86X60 149 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ZSWIM9Q86XI8 627 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 PABPC5Q96DU9 382 aaKnown RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 SERAC1Q96JX3 654 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ATOH8Q96SQ7 321 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 LMCD1Q9NZU5 365 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 POLG2Q9UHN1 485 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 NDUFAF1Q9Y375 327 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 LYPLA1O75608 230 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ADRM1Q16186 407 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 CXorf57Q6NSI4 855 aaKnown RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 CDHR3Q6ZTQ4 885 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ANKMY2Q8IV38 441 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 PYROXD2Q8N2H3 581 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 CATSPERZQ9NTU4 200 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 EMCNQ9ULC0 261 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 GREM1O60565 184 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 AHSGP02765 367 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 MYCNP04198 464 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 CCL5P13501 91 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ETS1P14921 441 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 HDCP19113 662 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 PRPH2P23942 346 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 BMPR1AP36894 532 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 CACNA2D1P54289 1103 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 MROH9Q5TGP6 573 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 LINC00299Q6ZSB3 139 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 TEX9Q8N6V9 391 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 HERVK_113Q902F9 699 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 GLMNQ92990 594 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 STMN2Q93045 179 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 SLC45A3Q96JT2 553 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 PRDM9Q9NQV7 894 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 SMYD2Q9NRG4 433 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 HEY2Q9UBP5 337 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 MTF2Q9Y483 593 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-206ENST00000397617 DENND4AQ7Z401 1863 aa5.86□□□□□ -1.47
PTPRD-206ENST00000397617 ARNTLO00327 626 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 TFE3P19532 575 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 VEGFBP49765 207 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 NAGLUP54802 743 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ELAVL3Q14576 367 aaKnown RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 DAB2IPQ5VWQ8 1189 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 NPNTQ6UXI9 565 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 FAM47EQ6ZV65 393 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 FSTL5Q8N475 847 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 TMEM151AQ8N4L1 468 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 UBE2E3Q969T4 207 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ALG14Q96F25 216 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 EHD1Q9H4M9 534 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 YY1AP1Q9H869 796 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CCDC177Q9NQR7 707 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CHRAC1Q9NRG0 131 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 DHRS7Q9Y394 339 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 CEP250Q9BV73 2442 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PRRG1O14668 218 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 GSC2O15499 205 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 DGKAP23743 735 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 SLC10A7Q0GE19 358 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ORC1Q13415 861 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 SQLEQ14534 574 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ARHGAP19Q14CB8 494 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 TRIM67Q6ZTA4 783 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 RSRC1Q96IZ7 334 aaKnown RBP5.85□□□□□ -1.47
PTPRD-206ENST00000397617 FEM1AQ9BSK4 669 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 Q9H521 79 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 C11orf49Q9H6J7 331 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 KCNK13Q9HB14 408 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 ZDHHC4Q9NPG8 344 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 TRPV5Q9NQA5 729 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 PCMTD2Q9NV79 361 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 NMRK1Q9NWW6 199 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 C17orf113A0A1B0GUU1 675 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 TPP1O14773 563 aa5.85□□□□□ -1.47
PTPRD-206ENST00000397617 NDUFS3O75489 264 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms