RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 QKIQ96PU8 341 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 RASSF1Q9NS23 344 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 SELENONQ9NZV5 590 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 KLHL3Q9UH77 587 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 DMTF1Q9Y222 760 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 FAM25AB3EWG3 89 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 FAM25CB3EWG5 89 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 FAM25GB3EWG6 89 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 STK25O00506 426 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 USP2O75604 605 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 SLC22A3O75751 556 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 EPN2O95208 641 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 NADKO95544 446 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 HOXB8P17481 243 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 KLRC2P26717 231 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 CXCR3P49682 368 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 MADCAM1Q13477 382 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 TP53BP2Q13625 1128 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 UBAP2Q5T6F2 1119 aaKnown RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 ZCCHC8Q6NZY4 707 aaKnown RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 ELMSAN1Q6PJG2 1045 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 GALNT5Q7Z7M9 940 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 HIPK1Q86Z02 1210 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 ZNF513Q8N8E2 541 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 C19orf18Q8NEA5 215 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 OR4L1Q8NH43 312 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 ZNF483Q8TF39 744 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 RSPH1Q8WYR4 309 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 REXO5Q96IC2 774 aaKnown RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 OR52B2Q96RD2 323 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 ALG2Q9H553 416 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 PDZD7Q9H5P4 517 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 COQ10BQ9H8M1 238 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 ADPRHL2Q9NX46 363 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 SLC25A13Q9UJS0 675 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 SAMHD1Q9Y3Z3 626 aaKnown RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 PCDHB12Q9Y5F1 795 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 FAM220BPB1ANY3 271 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 TCEA3O75764 348 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 CYP7B1O75881 506 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 STBD1O95210 358 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 ZBTB48P10074 688 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 XRCC1P18887 633 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 CD52P31358 61 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 CYP2C18P33260 490 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 ATP5C1P36542 298 aaKnown RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 HNF4AP41235 474 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 CENPAP49450 140 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 ZNF135P52742 658 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 PRKAG1P54619 331 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 NAA20P61599 178 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 PLD1Q13393 1074 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 LPIN1Q14693 890 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 PDZK1Q5T2W1 519 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 GLYATQ6IB77 296 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 CROCCP3Q8IVE0 287 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 PGBD3Q8N328 593 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 CMASQ8NFW8 434 aaPredicted RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 OR4K2Q8NGD2 314 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 C19orf60Q96EN9 201 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 HAPLN2Q9GZV7 340 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 TMPRSS4Q9NRS4 437 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 RBMX2Q9Y388 322 aaKnown RBP10.76□□□□□ -0.69
CCDC40-204ENST00000397545 TRPV2Q9Y5S1 764 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 MYBPHLA2RUH7 354 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 ZBTB14O43829 449 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 GCATO75600 419 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 IFNA14P01570 189 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 FCGRTP55899 365 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 DSC2Q02487 901 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 PRKD1Q15139 912 aaPredicted RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 TCEA2Q15560 299 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 RGMBQ6NW40 437 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 CASP12Q6UXS9 341 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 PHTF2Q8N3S3 785 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 ATAD1Q8NBU5 361 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 OR52E6Q96RD3 313 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 RNF208Q9H0X6 261 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 AGO3Q9H9G7 860 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 SSU72Q9NP77 194 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 TDRKHQ9Y2W6 561 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 POLR3HQ9Y535 204 aaPredicted RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 TNPO3Q9Y5L0 923 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 PPP2R3BQ9Y5P8 575 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 EFCAB10A6NFE3 127 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 KPNA3O00505 521 aaPredicted RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 WBP4O75554 376 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 MLYCDO95822 493 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 ANXA5P08758 320 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 CYP2A7P20853 494 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 THOP1P52888 689 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 XIAPP98170 497 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 PRKCQQ04759 706 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 PAGE2BQ5JRK9 111 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 TMEM214Q6NUQ4 689 aaKnown RBP10.75□□□□□ -0.69
CCDC40-204ENST00000397545 IGDCC3Q8IVU1 814 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 YAF2Q8IY57 180 aa10.75□□□□□ -0.69
CCDC40-204ENST00000397545 UBR7Q8N806 425 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms