RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 RNF208Q9H0X6 261 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 GOLPH3LQ9H4A5 285 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 EPHX3Q9H6B9 360 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 SLC39A2Q9NP94 309 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 SETD4Q9NVD3 440 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 MRPS18AQ9NVS2 196 aaKnown RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 LMCD1Q9NZU5 365 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ATP6V1HQ9UI12 483 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 DNPEPQ9ULA0 475 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ANGEL1Q9UNK9 670 aaKnown RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 PLEKHA6Q9Y2H5 1048 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 PCDHB2Q9Y5E7 798 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 U3KQV3 271 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 SPACA6W5XKT8 324 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ACOD1A6NK06 481 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 NRG2O14511 850 aaPredicted RBP6.81□□□□□ -1.32
SMCO1-201ENST00000397537 PRICKLE3O43900 615 aaPredicted RBP6.81□□□□□ -1.32
SMCO1-201ENST00000397537 CBFA2T3O75081 653 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 LEFTY1O75610 366 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 PCCBP05166 539 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 ZNF8P17098 575 aaPredicted RBP6.81□□□□□ -1.32
SMCO1-201ENST00000397537 CYP11B2P19099 503 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 NTSR1P30989 418 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 CSF2RBP32927 897 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 SOAT1P35610 550 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 SLC16A2P36021 539 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 EFNA5P52803 228 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 HUNKP57058 714 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 ZMYND11Q15326 602 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 ZIK1Q3SY52 487 aaPredicted RBP6.81□□□□□ -1.32
SMCO1-201ENST00000397537 EPC2Q52LR7 807 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 TAF1BQ53T94 588 aaPredicted RBP6.81□□□□□ -1.32
SMCO1-201ENST00000397537 SH2D4BQ5SQS7 431 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 AKNAD1Q5T1N1 836 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 HLA-DQA1Q5Y7H0 255 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 ANKRD40Q6AI12 368 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 TTC19Q6DKK2 380 aaPredicted RBP6.81□□□□□ -1.32
SMCO1-201ENST00000397537 FAM214BQ7L5A3 538 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 CUZD1Q86UP6 607 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 TTC5Q8N0Z6 440 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 CCNYQ8ND76 341 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 PIK3C3Q8NEB9 887 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 ZNF558Q96NG5 402 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 C17orf80Q9BSJ5 609 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 RTN4RQ9BZR6 473 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 TMEM117Q9H0C3 514 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 LRRC40Q9H9A6 602 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 KLC4Q9NSK0 619 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 ADAMTS6Q9UKP5 1117 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 VAV3Q9UKW4 847 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 PLAGL1Q9UM63 463 aa6.81□□□□□ -1.32
SMCO1-201ENST00000397537 LOC100509620A0A075B734 347 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 A0A087WV48 116 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 EDDM13A0A1B0GTR0 161 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 GSAPA4D1B5 854 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 TRIM49BA6NDI0 452 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 DNALI1O14645 258 aaPredicted RBP6.8□□□□□ -1.32
SMCO1-201ENST00000397537 MITFO75030 526 aaPredicted RBP6.8□□□□□ -1.32
SMCO1-201ENST00000397537 USP12O75317 370 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 SLC43A1O75387 559 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 DGAT1O75907 488 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 SERPINC1P01008 464 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 KRT6BP04259 564 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 THRBP10828 461 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 ELNP15502 786 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 PTPN6P29350 595 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 CCT6AP40227 531 aaKnown RBP6.8□□□□□ -1.32
SMCO1-201ENST00000397537 ARHGAP25P42331 645 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 KRT6CP48668 564 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 RPS6KA3P51812 740 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 PTTG1IPP53801 180 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 BNIP1Q12981 228 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 HNRNPDQ14103 355 aaKnown RBP6.8□□□□□ -1.32
SMCO1-201ENST00000397537 SLC39A14Q15043 492 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 HHATQ5VTY9 493 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 FAM91A1Q658Y4 838 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 SLC9A4Q6AI14 798 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 FCRLBQ6BAA4 426 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 OR6B2Q6IFH4 312 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 LIPIQ6XZB0 460 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 GLDNQ6ZMI3 551 aaPredicted RBP6.8□□□□□ -1.32
SMCO1-201ENST00000397537 HAUS6Q7Z4H7 955 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 TRIM46Q7Z4K8 759 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 SPATA21Q7Z572 469 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 DENND6AQ8IWF6 608 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 TRIML2Q8N7C3 387 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 FAM46DQ8NEK8 389 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 FBXO32Q969P5 355 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 C19orf60Q96EN9 201 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 REXO5Q96IC2 774 aaKnown RBP6.8□□□□□ -1.32
SMCO1-201ENST00000397537 DYDC2Q96IM9 177 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 VCPIP1Q96JH7 1222 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 ZFP42Q96MM3 310 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 SECISBP2Q96T21 854 aaKnown RBP6.8□□□□□ -1.32
SMCO1-201ENST00000397537 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 DUSP23Q9BVJ7 150 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 PLK3Q9H4B4 646 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 DNAI1Q9UI46 699 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 RAD54BQ9Y620 910 aa6.8□□□□□ -1.32
SMCO1-201ENST00000397537 MYOM3Q5VTT5 1437 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms