RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 BRAT1Q6PJG6 821 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 CEACAM20Q6UY09 585 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 LEKR1Q6ZMV7 388 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 GDF7Q7Z4P5 450 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 FAM72BQ86X60 149 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 FAM71AQ8IYT1 594 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 PLA2G15Q8NCC3 412 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 OR4D9Q8NGE8 314 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 CCL4L1Q8NHW4 92 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 TBC1D31Q96DN5 1066 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 ZNF641Q96N77 438 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-203ENST00000397378 DPYSL5Q9BPU6 564 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 ANP32EQ9BTT0 268 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 SLC25A23Q9BV35 468 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 TRIM55Q9BYV6 548 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 SPRY4Q9C004 299 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 SUV39H2Q9H5I1 410 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 LHX3Q9UBR4 397 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 AJAP1Q9UKB5 411 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-203ENST00000397378 PRSS38A1L453 326 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 ANKUB1A6NFN9 424 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 PDE2AO00408 941 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-203ENST00000397378 INSIG1O15503 277 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 LRCH4O75427 683 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 PIGNO95427 931 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 CBX6O95503 412 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 HOXB4P17483 251 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-203ENST00000397378 STX17P56962 302 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 YBEYP58557 167 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-203ENST00000397378 ATP11AP98196 1134 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 NKAIN2Q5VXU1 208 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 JMJD6Q6NYC1 403 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-203ENST00000397378 DNAAF5Q86Y56 855 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 APLFQ8IW19 511 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-203ENST00000397378 ESX1Q8N693 406 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 MSANTD4Q8NCY6 345 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 ZDHHC1Q8WTX9 485 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 NCAPGQ9BPX3 1015 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 ZPBPQ9BS86 351 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 TWSG1Q9GZX9 223 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 PDCL3Q9H2J4 239 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 NOL6Q9H6R4 1146 aaKnown RBP9.42□□□□□ -0.9
NEDD9-203ENST00000397378 SIX2Q9NPC8 291 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 SPATS2LQ9NUQ6 558 aaKnown RBP9.42□□□□□ -0.9
NEDD9-203ENST00000397378 TMEM9Q9P0T7 183 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 DNAJC12Q9UKB3 198 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 CROTQ9UKG9 612 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 ATP8A1Q9Y2Q0 1164 aa9.42□□□□□ -0.9
NEDD9-203ENST00000397378 TMEM184BQ9Y519 407 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-203ENST00000397378 ABCA2Q9BZC7 2435 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 PRRC2CQ9Y520 2896 aaKnown RBP9.41□□□□□ -0.9
NEDD9-203ENST00000397378 IGHV1OR21-1A0A087WYE8 117 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 GOLGA6L4A6NEF3 574 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 A8MU76 341 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 GOLGA8SH3BPF8 625 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 RECQL5O94762 991 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-203ENST00000397378 LSM8O95777 96 aaKnown RBP9.41□□□□□ -0.9
NEDD9-203ENST00000397378 FGF1P05230 155 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 PLEKP08567 350 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-203ENST00000397378 PNMA6AP0CW24 399 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-203ENST00000397378 CSF2RBP32927 897 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 RALGDSQ12967 914 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 SEMA5AQ13591 1074 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 CYTH1Q15438 398 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 RAB6CQ53S08 254 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 C2CD6Q53TS8 623 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 SNAP47Q5SQN1 464 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 LIPIQ6XZB0 460 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 SPNS3Q6ZMD2 512 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 STRADAQ7RTN6 431 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 ZSWIM9Q86XI8 627 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 ZNF354CQ86Y25 554 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 NRROSQ86YC3 692 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 RTL3Q8N8U3 475 aaKnown RBP9.41□□□□□ -0.9
NEDD9-203ENST00000397378 BMPERQ8N8U9 685 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 Q8NA96 180 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 NETO2Q8NC67 525 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 NANOS1Q8WY41 292 aaKnown RBP9.41□□□□□ -0.9
NEDD9-203ENST00000397378 C19orf60Q96EN9 201 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 RNF31Q96EP0 1072 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 TUBGCP5Q96RT8 1024 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 LGR4Q9BXB1 951 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 GSDMCQ9BYG8 508 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 MAGEB5Q9BZ81 275 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 KLC2Q9H0B6 622 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 RAB6CQ9H0N0 254 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 WDR26Q9H7D7 661 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 APMAPQ9HDC9 416 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 TRNAU1APQ9NX07 287 aaKnown RBP9.41□□□□□ -0.9
NEDD9-203ENST00000397378 TAAR2Q9P1P5 351 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 PDP2Q9P2J9 529 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 MTORP42345 2549 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 DNHD1Q96M86 4753 aa9.41□□□□□ -0.9
NEDD9-203ENST00000397378 PIPSLA2A3N6 862 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 BUB1BO60566 1050 aaPredicted RBP9.4□□□□□ -0.9
NEDD9-203ENST00000397378 DPM1O60762 260 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 ECEL1O95672 775 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 DLGAP3O95886 979 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 ELFN1P0C7U0 828 aa9.4□□□□□ -0.9
NEDD9-203ENST00000397378 MYCLP1P12525 358 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms