RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CCDC42Q96M95 316 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 RNF157Q96PX1 679 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 LGMNQ99538 433 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 ABCG8Q9H221 673 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 CARS2Q9HA77 564 aaKnown RBP18.28■□□□□ 0.52
FXN-203ENST00000396366 ASCL3Q9NQ33 180 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 SPATS2LQ9NUQ6 558 aaKnown RBP18.28■□□□□ 0.52
FXN-203ENST00000396366 HYOU1Q9Y4L1 999 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 ST14Q9Y5Y6 855 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 ARHGEF17Q96PE2 2063 aaPredicted RBP18.27■□□□□ 0.52
FXN-203ENST00000396366 A0A0J9YYE9 177 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 A0A1W2PQM1 296 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 LRRD1A4D1F6 860 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 B4DGG1 531 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 KCNK1O00180 336 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 TCEA3O75764 348 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 JCHAINP01591 159 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 TRBC1P01850 177 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 CDK3Q00526 305 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 SPIDRQ14159 915 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 TSR1Q2NL82 804 aaKnown RBP18.27■□□□□ 0.52
FXN-203ENST00000396366 ALG1LQ6GMV1 187 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 RAET1GQ6H3X3 334 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 TIGD7Q6NT04 549 aaPredicted RBP18.27■□□□□ 0.52
FXN-203ENST00000396366 USP45Q70EL2 814 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 B4GALNT4Q76KP1 1039 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 NRROSQ86YC3 692 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 SPACA3Q8IXA5 215 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 PLD5Q8N7P1 536 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 SCAMP4Q969E2 229 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 FATE1Q969F0 183 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 HIC2Q96JB3 615 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 ZNF578Q96N58 590 aaPredicted RBP18.27■□□□□ 0.52
FXN-203ENST00000396366 AGAP2Q99490 1192 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 TDRD1Q9BXT4 1180 aaKnown RBP18.27■□□□□ 0.52
FXN-203ENST00000396366 FRMD8Q9BZ67 464 aaPredicted RBP18.27■□□□□ 0.52
FXN-203ENST00000396366 DPEP2Q9H4A9 486 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 PRORYQ9H606 182 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 PHPT1Q9NRX4 125 aaPredicted RBP18.27■□□□□ 0.52
FXN-203ENST00000396366 RNF215Q9Y6U7 377 aa18.27■□□□□ 0.52
FXN-203ENST00000396366 PTPRQQ9UMZ3 2332 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 PSMD11O00231 422 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 DXOO77932 396 aaKnown RBP18.26■□□□□ 0.51
FXN-203ENST00000396366 SOD1P00441 154 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 RPLP0P05388 317 aaKnown RBP18.26■□□□□ 0.51
FXN-203ENST00000396366 MMP2P08253 660 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 TNNT1P13805 278 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 NFKBIAP25963 317 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 GNPDA1P46926 289 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 EPHB1P54762 984 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 TLE3Q04726 772 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 ZBTB17Q13105 803 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 DOK6Q6PKX4 331 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 NPNTQ6UXI9 565 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 TRIM74Q86UV6 250 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 CCDC13Q8IYE1 715 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 LSMEM2Q8N112 164 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 SLC46A1Q96NT5 459 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 GFM1Q96RP9 751 aaKnown RBP18.26■□□□□ 0.51
FXN-203ENST00000396366 CEP41Q9BYV8 373 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 FOXP3Q9BZS1 431 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 LCMT1Q9UIC8 334 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 ATXN7L1Q9ULK2 861 aaPredicted RBP18.26■□□□□ 0.51
FXN-203ENST00000396366 SUFUQ9UMX1 484 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 TMEM98Q9Y2Y6 226 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 PLEKHM1Q9Y4G2 1056 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 HEY1Q9Y5J3 304 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 ATRXP46100 2492 aa18.26■□□□□ 0.51
FXN-203ENST00000396366 UNC13CQ8NB66 2214 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 MGAQ8IWI9 3026 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 AGRPO00253 132 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 PDE2AO00408 941 aaPredicted RBP18.25■□□□□ 0.51
FXN-203ENST00000396366 CLDN7O95471 211 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 FGF1P05230 155 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 TPM1P09493 284 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 AK4P27144 223 aaPredicted RBP18.25■□□□□ 0.51
FXN-203ENST00000396366 ARHGAP25P42331 645 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 GPR1P46091 355 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 PCBP4P57723 403 aaKnown RBP18.25■□□□□ 0.51
FXN-203ENST00000396366 DPTQ07507 201 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 TBX2Q13207 712 aaPredicted RBP18.25■□□□□ 0.51
FXN-203ENST00000396366 CERCAMQ5T4B2 595 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 NDUFAF2Q8N183 169 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 CNTD1Q8N815 330 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 ZNF248Q8NDW4 579 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 LPCAT1Q8NF37 534 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 GPBAR1Q8TDU6 330 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 RNF25Q96BH1 459 aaPredicted RBP18.25■□□□□ 0.51
FXN-203ENST00000396366 AP2M1Q96CW1 435 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 HDAC11Q96DB2 347 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 LRRN3Q9H3W5 708 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 PCDH9Q9HC56 1237 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 KCTD5Q9NXV2 234 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 LRIT1Q9P2V4 623 aa18.25■□□□□ 0.51
FXN-203ENST00000396366 MTA2O94776 668 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 MX2P20592 715 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 CES1P23141 567 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 CD86P42081 329 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 MAZP56270 477 aaKnown RBP18.24■□□□□ 0.51
FXN-203ENST00000396366 ERVPABLB-1P60509 514 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms