RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 TIMP2P16035 220 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 OGNP20774 298 aaKnown RBP15.4■□□□□ 0.06
VAMP1-202ENST00000396308 MC4RP32245 332 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 MMP12P39900 470 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 SATB1Q01826 763 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 ZBTB16Q05516 673 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 UBXN2BQ14CS0 331 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 LRRC73Q5JTD7 316 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 RNF187Q5TA31 235 aaPredicted RBP15.4■□□□□ 0.06
VAMP1-202ENST00000396308 CRTC1Q6UUV9 634 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 PACS1Q6VY07 963 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 PTAR1Q7Z6K3 402 aaPredicted RBP15.4■□□□□ 0.06
VAMP1-202ENST00000396308 CNTN4Q8IWV2 1026 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 UNC5BQ8IZJ1 945 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 KRT222Q8N1A0 295 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 DCAKDQ8WVC6 231 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 ARRDC3Q96B67 414 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 ZBTB9Q96C00 473 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 CDKN2AIPNLQ96HQ2 116 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 TBATAQ96M53 351 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 OMDQ99983 421 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 DHRS4Q9BTZ2 278 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 POLMQ9NP87 494 aaPredicted RBP15.4■□□□□ 0.06
VAMP1-202ENST00000396308 IL1RAPL1Q9NZN1 696 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 IL17CQ9P0M4 197 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 FKBPLQ9UIM3 349 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 SARDHQ9UL12 918 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 PLXNA2O75051 1894 aa15.4■□□□□ 0.06
VAMP1-202ENST00000396308 GLYATL1P3A0A0U1RQE8 302 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 RGSL1A5PLK6 1076 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 A8MX80 341 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 CXorf49A8MYA2 514 aaPredicted RBP15.39■□□□□ 0.05
VAMP1-202ENST00000396308 H0Y858 1186 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 H7C0S8 307 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 CD3EAPO15446 510 aaKnown RBP15.39■□□□□ 0.05
VAMP1-202ENST00000396308 PSMA3P25788 255 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 ARCN1P48444 511 aaKnown RBP15.39■□□□□ 0.05
VAMP1-202ENST00000396308 CD151P48509 253 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 TTPAP49638 278 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 CACNG1Q06432 222 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 ZRANB3Q5FWF4 1079 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 TEDDM1Q5T9Z0 273 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 LYPLAL1Q5VWZ2 237 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 GALNT7Q86SF2 657 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 CACUL1Q86Y37 369 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 RAVER1Q8IY67 606 aaKnown RBP15.39■□□□□ 0.05
VAMP1-202ENST00000396308 CBARPQ8N350 705 aaPredicted RBP15.39■□□□□ 0.05
VAMP1-202ENST00000396308 CXorf40AQ8TE69 158 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 ERLEC1Q96DZ1 483 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 PLEKHG4BQ96PX9 1271 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 SMIM14Q96QK8 99 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 RBBP8Q99708 897 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 BPIFA1Q9NP55 256 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 SMYD2Q9NRG4 433 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 CTNNAL1Q9UBT7 734 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 FBXO5Q9UKT4 447 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 CORO1CQ9ULV4 474 aaPredicted RBP15.39■□□□□ 0.05
VAMP1-202ENST00000396308 NOVA2Q9UNW9 492 aaKnown RBP15.39■□□□□ 0.05
VAMP1-202ENST00000396308 NCKAP1Q9Y2A7 1128 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 ATG2BQ96BY7 2078 aa15.39■□□□□ 0.05
VAMP1-202ENST00000396308 KANSL1LA0AUZ9 987 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 GOLGA8TH3BQL2 631 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 CCL22O00626 93 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 MID1O15344 667 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 RNASEH2AO75792 299 aaKnown RBP15.38■□□□□ 0.05
VAMP1-202ENST00000396308 PRAMEF1O95521 474 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 SYF2O95926 243 aaKnown RBP15.38■□□□□ 0.05
VAMP1-202ENST00000396308 MT-ND3P03897 115 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 CD72P21854 359 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 ARNTP27540 789 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 SLC1A2P43004 574 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 ARSDP51689 593 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 STC1P52823 247 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 RPS14P62263 151 aaKnown RBP15.38■□□□□ 0.05
VAMP1-202ENST00000396308 DNAJC3Q13217 504 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 ITGA9Q13797 1035 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 ACOX1Q15067 660 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 ZNF284Q2VY69 593 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 CERS6Q6ZMG9 384 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 TSPAN33Q86UF1 283 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 KBTBD6Q86V97 674 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 SIX5Q8N196 739 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 HDDC3Q8N4P3 179 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 ARFGAP2Q8N6H7 521 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 C2CD4AQ8NCU7 369 aaPredicted RBP15.38■□□□□ 0.05
VAMP1-202ENST00000396308 GPR150Q8NGU9 434 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 ULK4Q96C45 1275 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 SGSM3Q96HU1 749 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 SMC6Q96SB8 1091 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 TCF12Q99081 682 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 AGAP2Q99490 1192 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 CCDC68Q9H2F9 335 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 RHOJQ9H4E5 214 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 LTB4R2Q9NPC1 389 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 INTS10Q9NVR2 710 aaKnown RBP15.38■□□□□ 0.05
VAMP1-202ENST00000396308 KCTD5Q9NXV2 234 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 GGT7Q9UJ14 662 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 CRLS1Q9UJA2 301 aa15.38■□□□□ 0.05
VAMP1-202ENST00000396308 GOLGA8CPA6NN73 597 aa15.37■□□□□ 0.05
VAMP1-202ENST00000396308 STK25O00506 426 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms