RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 SEPHS2Q99611 448 aa6.56□□□□□ -1.36
BDNF-203ENST00000395978 PRPF18Q99633 342 aaKnown RBP6.56□□□□□ -1.36
BDNF-203ENST00000395978 IL12RB2Q99665 862 aa6.56□□□□□ -1.36
BDNF-203ENST00000395978 GPR21Q99679 349 aa6.56□□□□□ -1.36
BDNF-203ENST00000395978 UNC93B1Q9H1C4 597 aa6.56□□□□□ -1.36
BDNF-203ENST00000395978 PARVBQ9HBI1 364 aa6.56□□□□□ -1.36
BDNF-203ENST00000395978 DYRK4Q9NR20 520 aa6.56□□□□□ -1.36
BDNF-203ENST00000395978 ZDHHC2Q9UIJ5 367 aa6.56□□□□□ -1.36
BDNF-203ENST00000395978 LEF1Q9UJU2 399 aaPredicted RBP6.56□□□□□ -1.36
BDNF-203ENST00000395978 BLOC1S6Q9UL45 172 aa6.56□□□□□ -1.36
BDNF-203ENST00000395978 ZFP37Q9Y6Q3 630 aaPredicted RBP6.56□□□□□ -1.36
BDNF-203ENST00000395978 A0A0J9YYE9 177 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 OR51F1A6NGY5 319 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CAPN8A6NHC0 703 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 SLC38A8A6NNN8 435 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 A8MX80 341 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 MAFKO60675 156 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 DEAF1O75398 565 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 CNTN5O94779 1100 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 ESRRBO95718 433 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 AMHP03971 560 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CYP11A1P05108 521 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 VCLP18206 1134 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 ITGAXP20702 1163 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 OGNP20774 298 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 CD68P34810 354 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 GPR15P49685 360 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 DDX39BQ13838 428 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 MS4A13Q5J8X5 152 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 RBM20Q5T481 1227 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 CAMK1DQ8IU85 385 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 UMODL1-AS1Q8N2C9 162 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 DNAJB14Q8TBM8 379 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 C2orf15Q8WU43 125 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 OSCP1Q8WVF1 389 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 TRIB2Q92519 343 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 B3GALT6Q96L58 329 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 ZNF570Q96NI8 536 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 ZNF599Q96NL3 588 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 HOPXQ9BPY8 73 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 BDH2Q9BUT1 245 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CCDC106Q9BWC9 280 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 RMND5AQ9H871 391 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 NMUR1Q9HB89 426 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 MRM3Q9HC36 420 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 MRPL17Q9NRX2 175 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 TMEM39AQ9NV64 488 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 SQORQ9Y6N5 450 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 KIF13BQ9NQT8 1826 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 C1orf232A0A0U1RR37 186 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 TMEM88BA6NKF7 163 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 A8MT66 165 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 BBIP1A8MTZ0 92 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 TBC1D4O60343 1298 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 SEC22BO75396 215 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 FKBP9O95302 570 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 PAPSS2O95340 614 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 CKBP12277 381 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CTPS1P17812 591 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 IMPDH1P20839 514 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 MAPK1P28482 360 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 PIK3CGP48736 1102 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 AFF1P51825 1210 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 RPS24P62847 133 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 LCP2Q13094 533 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 GPR17Q13304 367 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 HERC3Q15034 1050 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 ZNF284Q2VY69 593 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 SIRPB2Q5JXA9 342 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 FAM171BQ6P995 826 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 TPGS1Q6ZTW0 290 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 FKBP9P1Q75LS8 142 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 LRRTM3Q86VH5 581 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 FBXO22Q8NEZ5 403 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 LPGAT1Q92604 370 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 NMD3Q96D46 503 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 THAP11Q96EK4 314 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 ZFRQ96KR1 1074 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 C9orf16Q9BUW7 83 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 ATP13A3Q9H7F0 1226 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 TMEM248Q9NWD8 314 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 GABRQQ9UN88 632 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 TTC24A2A3L6 582 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 DPPA5A6NC42 116 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 UBXN8O00124 270 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CLOCKO15516 846 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 RGS14O43566 566 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 ZBTB14O43829 449 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 LYNP07948 512 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CDH2P19022 906 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 CCND3P30281 292 aaPredicted RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 GMPRP36959 345 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 ACVRL1P37023 503 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 SATB1Q01826 763 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 CLCQ05315 142 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 BNIP2Q12982 314 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 FAM98BQ52LJ0 330 aaKnown RBP6.55□□□□□ -1.36
BDNF-203ENST00000395978 XKR4Q5GH76 650 aa6.55□□□□□ -1.36
BDNF-203ENST00000395978 PRSS55Q6UWB4 352 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms