RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 DMC1Q14565 340 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 RABGAP1LQ5R372 815 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 TEDDM1Q5T9Z0 273 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PLPP4Q5VZY2 271 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 THOC7Q6I9Y2 204 aaKnown RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 NADSYN1Q6IA69 706 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 RWDD4Q6NW29 188 aaKnown RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 DCDC5Q6ZRR9 648 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 FAM174AQ8TBP5 190 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PPP4R1Q8TF05 950 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 ZNF419Q96HQ0 510 aaPredicted RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 SERAC1Q96JX3 654 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 FAM111AQ96PZ2 611 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PSKH2Q96QS6 385 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PRPF18Q99633 342 aaKnown RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 SMAD5Q99717 465 aaKnown RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 MED10Q9BTT4 135 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 LMAN2LQ9H0V9 348 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 CHRDQ9H2X0 955 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 HIPK3Q9H422 1215 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 TRPV4Q9HBA0 871 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 SMYD2Q9NRG4 433 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 RAB6BQ9NRW1 208 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 DDIT4Q9NX09 232 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 FBXO10Q9UK96 956 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 CDH7Q9ULB5 785 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 COQ6Q9Y2Z9 468 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 DNMT3AQ9Y6K1 912 aaPredicted RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 MYOCOSA0A1B0GUC4 107 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 WDR27A2RRH5 827 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 MEI4A8MW99 385 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 C10orf142B7Z368 130 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ZNF701M0R085 212 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 TIMM44O43615 452 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 KLK8O60259 260 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 CLDN11O75508 207 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 POMCP01189 267 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 POLBP06746 335 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 HNRNPA1P09651 372 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS41-203ENST00000395969 ATXN1LP0C7T5 689 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 HLA-DPA1P20036 260 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 OGNP20774 298 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 ACAT1P24752 427 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 GP5P40197 560 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 HSPA13P48723 471 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 HNRNPFP52597 415 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 WDR5P61964 334 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 ZBTB17Q13105 803 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 KCNC3Q14003 757 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 COL19A1Q14993 1142 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 UGP2Q16851 508 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 GRAMD1BQ3KR37 738 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 CTXN3Q4LDR2 81 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 RTP2Q5QGT7 225 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 HP1BP3Q5SSJ5 553 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 BTBD8Q5XKL5 378 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ITIH5Q86UX2 942 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 PQLC1Q8N2U9 271 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 OTUB2Q96DC9 234 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 TCF12Q99081 682 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 CEP44Q9C0F1 390 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 MFSD1Q9H3U5 465 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ENAMQ9NRM1 1142 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 RABL2AQ9UBK7 228 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 ST14Q9Y5Y6 855 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 WASH3PC4AMC7 463 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 H7C0C1 242 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 GOLGA8RI6L899 631 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 GLRA3O75311 464 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 TADA2AO75478 443 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 C8BP07358 591 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 INHBBP09529 407 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 MYCLP1P12525 358 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 GRK2P25098 689 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ARNTP27540 789 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 HOXD9P28356 352 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 PPARGP37231 505 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 ATP5OP48047 213 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ATXN1P54253 815 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 RPS3AP61247 264 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 UBAP2LQ14157 1087 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 CNGA3Q16281 694 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 ANKDD1AQ495B1 522 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 SLC39A12Q504Y0 691 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 CDKL4Q5MAI5 379 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 FAM182AQ5T1J6 154 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 DEPDC1Q5TB30 811 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 RNF19BQ6ZMZ0 732 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 FAM131BQ86XD5 332 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 GALNT13Q8IUC8 556 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 PYROXD2Q8N2H3 581 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 FBXW8Q8N3Y1 598 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 CCDC33Q8N5R6 958 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 CATSPER1Q8NEC5 780 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 SLC22A17Q8WUG5 538 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 CERS2Q96G23 380 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 PDLIM5Q96HC4 596 aaKnown RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 MRGPRX2Q96LB1 330 aa5.37□□□□□ -1.55
VPS41-203ENST00000395969 KLF6Q99612 283 aaPredicted RBP5.37□□□□□ -1.55
VPS41-203ENST00000395969 FAM118BQ9BPY3 351 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms