RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 DNAJC3Q13217 504 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 PARS2Q7L3T8 475 aaKnown RBP13.68□□□□□ -0.22
VAPB-202ENST00000395802 GALNT7Q86SF2 657 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 OTUD6BQ8N6M0 293 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 GPR150Q8NGU9 434 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 TBATAQ96M53 351 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 TCF12Q99081 682 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 POLR3BQ9NW08 1133 aaPredicted RBP13.68□□□□□ -0.22
VAPB-202ENST00000395802 CTNNAL1Q9UBT7 734 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 B4GALT6Q9UBX8 382 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 SARDHQ9UL12 918 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 CA14Q9ULX7 337 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 NDRG2Q9UN36 371 aaKnown RBP13.68□□□□□ -0.22
VAPB-202ENST00000395802 SLC30A1Q9Y6M5 507 aa13.68□□□□□ -0.22
VAPB-202ENST00000395802 KANSL1LA0AUZ9 987 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 CLDN7O95471 211 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 C1QAP02745 245 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 SNRPAP09012 282 aaKnown RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 ELFN1P0C7U0 828 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 OGNP20774 298 aaKnown RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 PMLP29590 882 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 TMPRSS15P98073 1019 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 GABPB1Q06547 395 aaPredicted RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 CDKN3Q16667 212 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 RNF187Q5TA31 235 aaPredicted RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 ZNF470Q6ECI4 717 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 CERS6Q6ZMG9 384 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 KDM7AQ6ZMT4 941 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 KBTBD6Q86V97 674 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 OR13C4Q8NGS5 318 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 DTX3LQ8TDB6 740 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 MRRFQ96E11 262 aaKnown RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 PLEKHG4BQ96PX9 1271 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 POLMQ9NP87 494 aaPredicted RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 ZDHHC4Q9NPG8 344 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 CATSPERZQ9NTU4 200 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 TBK1Q9UHD2 729 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 MMP17Q9ULZ9 603 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 CXorf49A8MYA2 514 aaPredicted RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 CD3EAPO15446 510 aaKnown RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 ADAM23O75077 832 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 GOT2P00505 430 aaKnown RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 ARNTP27540 789 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 SPAM1P38567 509 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 MMP12P39900 470 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 POLD2P49005 469 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 TTPAP49638 278 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 MAGOHP61326 146 aaKnown RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 PTSQ03393 145 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 TMED2Q15363 201 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 LYPLAL1Q5VWZ2 237 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 PTAR1Q7Z6K3 402 aaPredicted RBP13.67□□□□□ -0.22
VAPB-202ENST00000395802 STRA8Q7Z7C7 330 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 TMPRSS6Q8IU80 811 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 CILP2Q8IUL8 1156 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 UNC5BQ8IZJ1 945 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 DCAKDQ8WVC6 231 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 ASB2Q96Q27 587 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 OMDQ99983 421 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 NCKAP1Q9Y2A7 1128 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 KCTD3Q9Y597 815 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 ACTL7BQ9Y614 415 aa13.67□□□□□ -0.22
VAPB-202ENST00000395802 GLYATL1P3A0A0U1RQE8 302 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 CCDC162PA2VCL2 907 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 CHURC1-FNTBB4DL54 471 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 TSPAN6O43657 245 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 BUD23O43709 281 aaKnown RBP13.66□□□□□ -0.22
VAPB-202ENST00000395802 AP1G1O43747 822 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 C7P10643 843 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 CHRNB1P11230 501 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 ACADMP11310 421 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 ITGALP20701 1170 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 MC4RP32245 332 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 DGKEP52429 567 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 STC1P52823 247 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 CACNG1Q06432 222 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 ITGA9Q13797 1035 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 CKAP5Q14008 2032 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 EFTUD2Q15029 972 aaKnown RBP eCLIP13.66□□□□□ -0.22
VAPB-202ENST00000395802 POM121L1PQ3SYA9 428 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 GPR33Q49SQ1 333 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 IER5LQ5T953 404 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 PACS1Q6VY07 963 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 NRSN1Q8IZ57 195 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 GJD3Q8N144 294 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 C2CD4AQ8NCU7 369 aaPredicted RBP13.66□□□□□ -0.22
VAPB-202ENST00000395802 ARRDC3Q96B67 414 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 OSBPL6Q9BZF3 934 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 BPIFA1Q9NP55 256 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 SMYD2Q9NRG4 433 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 INTS10Q9NVR2 710 aaKnown RBP13.66□□□□□ -0.22
VAPB-202ENST00000395802 FBXO5Q9UKT4 447 aa13.66□□□□□ -0.22
VAPB-202ENST00000395802 CORO1CQ9ULV4 474 aaPredicted RBP13.66□□□□□ -0.22
VAPB-202ENST00000395802 A0A1W2PQF6 199 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 GOLGA8TH3BQL2 631 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 AREL1O15033 823 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 MID1O15344 667 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
VAPB-202ENST00000395802 BMP1P13497 986 aa13.65□□□□□ -0.22
VAPB-202ENST00000395802 CD72P21854 359 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms