RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ZNF229Q9UJW7 825 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 H3BNX3 289 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 SNAI1O95863 264 aaPredicted RBP16.13■□□□□ 0.17
PCDH1-203ENST00000394536 C1QAP02745 245 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 OCM2P0CE71 109 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 OCMP0CE72 109 aaPredicted RBP16.13■□□□□ 0.17
PCDH1-203ENST00000394536 DGCR6Q14129 220 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 TSNQ15631 228 aaKnown RBP16.13■□□□□ 0.17
PCDH1-203ENST00000394536 PRMT9Q6P2P2 845 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 LGI2Q8N0V4 545 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 ATAD1Q8NBU5 361 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 MTFMTQ96DP5 389 aaKnown RBP16.13■□□□□ 0.17
PCDH1-203ENST00000394536 SLC45A3Q96JT2 553 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 ARL5AQ9Y689 179 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 MOXD2PA6NHM9 499 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 HS6ST1O60243 411 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 VAC14Q08AM6 782 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 ITGA7Q13683 1181 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 HNRNPDQ14103 355 aaKnown RBP16.12■□□□□ 0.17
PCDH1-203ENST00000394536 CTXN3Q4LDR2 81 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 KIAA0930Q6ICG6 404 aaPredicted RBP16.12■□□□□ 0.17
PCDH1-203ENST00000394536 SPESP1Q6UW49 350 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 XKR5Q6UX68 686 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 GPSM1Q86YR5 675 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 PRICKLE1Q96MT3 831 aaPredicted RBP16.12■□□□□ 0.17
PCDH1-203ENST00000394536 TMEM74Q96NL1 305 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 OLFM1Q99784 485 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 ZYG11BQ9C0D3 744 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 ZDHHC7Q9NXF8 308 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 F5H5T6 163 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 CYP2C18P33260 490 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 STT3AP46977 705 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 PSMD7P51665 324 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 FAM98BQ52LJ0 330 aaKnown RBP16.12■□□□□ 0.17
PCDH1-203ENST00000394536 OR4L1Q8NH43 312 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 GRIN3AQ8TCU5 1115 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 FBXL20Q96IG2 436 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 TRMOQ9BU70 441 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 BLOC1S6Q9UL45 172 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 ARL5CA6NH57 179 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 HTRA2O43464 458 aaPredicted RBP16.12■□□□□ 0.17
PCDH1-203ENST00000394536 DENRO43583 198 aaKnown RBP16.12■□□□□ 0.17
PCDH1-203ENST00000394536 MAN1A2O60476 641 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 ZNF682O95780 498 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 GSRP00390 522 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 TFPTP0C1Z6 253 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 GABRB3P28472 473 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 GRK4P32298 578 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 GGT5P36269 586 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 IL5RAQ01344 420 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 MAPK11Q15759 364 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 PERM1Q5SV97 790 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 ANKRD23Q86SG2 305 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 OR4K2Q8NGD2 314 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 OSCP1Q8WVF1 389 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 NSUN5Q96P11 429 aaKnown RBP16.12■□□□□ 0.17
PCDH1-203ENST00000394536 PLGRKTQ9HBL7 147 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 WWOXQ9NZC7 414 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 KIF17Q9P2E2 1029 aa16.12■□□□□ 0.17
PCDH1-203ENST00000394536 A0A1B0GTW7 788 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 MAGEB3O15480 346 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 GOT2P00505 430 aaKnown RBP16.11■□□□□ 0.17
PCDH1-203ENST00000394536 SPATA31D3P0C874 917 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 ENTPD1P49961 510 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 DIO3P55073 304 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 HERC3Q15034 1050 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 FAM219BQ5XKK7 198 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 SPATA31D4Q6ZUB0 917 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 C14orf80Q86SX3 495 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 ADCK1Q86TW2 530 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 SLC25A51Q9H1U9 297 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 ABCG8Q9H221 673 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 ALG2Q9H553 416 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 TIMMDC1Q9NPL8 285 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 LRFN2Q9ULH4 789 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 PPP6CO00743 305 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 TMED10P49755 219 aaKnown RBP16.11■□□□□ 0.17
PCDH1-203ENST00000394536 CLCQ05315 142 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 DDX39BQ13838 428 aaKnown RBP16.11■□□□□ 0.17
PCDH1-203ENST00000394536 KCTD13Q8WZ19 329 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 HOPXQ9BPY8 73 aaPredicted RBP16.11■□□□□ 0.17
PCDH1-203ENST00000394536 WDR6Q9NNW5 1121 aaKnown RBP16.11■□□□□ 0.17
PCDH1-203ENST00000394536 ZNHIT2Q9UHR6 403 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 KDM1AO60341 852 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 SLC22A3O75751 556 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 CNMDO75829 334 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 TPP2P29144 1249 aaPredicted RBP16.11■□□□□ 0.17
PCDH1-203ENST00000394536 HPCAP84074 193 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 KIAA0408Q6ZU52 694 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 SAPCD2Q86UD0 394 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 CPSF7Q8N684 471 aaKnown RBP16.11■□□□□ 0.17
PCDH1-203ENST00000394536 OR56A4Q8NGH8 313 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 GTF3C2Q8WUA4 911 aaPredicted RBP16.11■□□□□ 0.17
PCDH1-203ENST00000394536 ANKRD49Q8WVL7 239 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 GLMNQ92990 594 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 ASIC4Q96FT7 647 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 GPR21Q99679 349 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 MAF1Q9H063 256 aa16.11■□□□□ 0.17
PCDH1-203ENST00000394536 IRAK2O43187 625 aa16.1■□□□□ 0.17
PCDH1-203ENST00000394536 IMPDH1P20839 514 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms