RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TP53INP2Q8IXH6 220 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 RAVER1Q8IY67 606 aaKnown RBP17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 PGBD5Q8N414 524 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 ZDHHC1Q8WTX9 485 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 NSMCE1Q8WV22 266 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 TEKT4Q8WW24 435 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 CSPG4P5Q96PW8 444 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 SEMA3CQ99985 751 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 DPYSL5Q9BPU6 564 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 NOD2Q9HC29 1040 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 TAAR2Q9P1P5 351 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 PCDHGA3Q9Y5H0 932 aa17.47■□□□□ 0.39
SNRPA1-202ENST00000394082 RHPN2P1A8MT19 583 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 A8MX80 341 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 C9orf172C9J069 976 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 GOLGA6L22H0YM25 854 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 PGLSO95336 258 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 MBD3O95983 291 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 KRT10P13645 584 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 LHCGRP22888 699 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 IL1R2P27930 398 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 KLHL30Q0D2K2 578 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 LINC00303Q3SY05 128 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 MAP9Q49MG5 647 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 FILIP1LQ4L180 1135 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 FIGNQ5HY92 759 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 MANEAQ5SRI9 462 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 MARC1Q5VT66 337 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 USP45Q70EL2 814 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 HSD11B1LQ7Z5J1 315 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 TECPR1Q7Z6L1 1165 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 NDUFAF2Q8N183 169 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 TEX26Q8N6G2 289 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 AOPEPQ8N6M6 819 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 NIPA2Q8N8Q9 360 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 ZSCAN1Q8NBB4 408 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 USP7Q93009 1102 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 ZNF653Q96CK0 615 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 SEMA6CQ9H3T2 930 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 RCOR3Q9P2K3 495 aaPredicted RBP17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 MOSPD1Q9UJG1 213 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 SUFUQ9UMX1 484 aa17.46■□□□□ 0.39
SNRPA1-202ENST00000394082 SMTNL1A8MU46 457 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 PYGLP06737 847 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 AMPD1P23109 780 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 ETV5P41161 510 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 ETV3P41162 512 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 MMP13P45452 471 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 TYRO3Q06418 890 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 TRAF2Q12933 501 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 C16orf72Q14CZ0 275 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 PHF19Q5T6S3 580 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 ARMC12Q5T9G4 340 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 E4F1Q66K89 784 aaPredicted RBP17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 Q6ZVL8 140 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 ATPAF2Q8N5M1 289 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 EXD3Q8N9H8 876 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 OR4D9Q8NGE8 314 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 PDCD6IPQ8WUM4 868 aaKnown RBP17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 STARD5Q9NSY2 213 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 ETNK2Q9NVF9 386 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 FOXJ2Q9P0K8 574 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 MYO18BQ8IUG5 2567 aa17.45■□□□□ 0.38
SNRPA1-202ENST00000394082 BSNQ9UPA5 3926 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 A0A1B0GTH6 734 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 NPIPB15A6NHN6 443 aaPredicted RBP17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 FZD6O60353 706 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 ECEL1O95672 775 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 RARAP10276 462 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 ZNF30P17039 623 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 CES1P23141 567 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 CD1CP29017 333 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 LIMK2P53671 638 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 MAZP56270 477 aaKnown RBP17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 OR1D5P58170 312 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 CTBSQ01459 385 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 ALG1LQ6GMV1 187 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 ADAMTSL4Q6UY14 1074 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 ZNF574Q6ZN55 896 aaPredicted RBP17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 ZNF765Q7L2R6 523 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 NAGSQ8N159 534 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 FAM71BQ8TC56 605 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 PIH1D2Q8WWB5 315 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 FATE1Q969F0 183 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 CDH19Q9H159 772 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 CLMPQ9H6B4 373 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 RDH14Q9HBH5 336 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 AMACRQ9UHK6 382 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 DNPEPQ9ULA0 475 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 PCDHGA4Q9Y5G9 962 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 ST14Q9Y5Y6 855 aa17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 BZW2Q9Y6E2 419 aaKnown RBP17.44■□□□□ 0.38
SNRPA1-202ENST00000394082 IGHV5-10-1A0A0J9YXX1 117 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 TTC24A2A3L6 582 aaPredicted RBP17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 STMND1H3BQB6 276 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 ALDH4A1P30038 563 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 ADCY8P40145 1251 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 GNPDA1P46926 289 aa17.43■□□□□ 0.38
SNRPA1-202ENST00000394082 FASLGP48023 281 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms