RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 GIPC2Q8TF65 315 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 SCLYQ96I15 445 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 SLC45A3Q96JT2 553 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 SOX17Q9H6I2 414 aaPredicted RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 TRAF6Q9Y4K3 522 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 ACOT8O14734 319 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 HTRA2O43464 458 aaPredicted RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 AP1G1O43747 822 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 TSPAN3O60637 253 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 ATP6V1G1O75348 118 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 CYP11A1P05108 521 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 PRKAA2P54646 552 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 PHEXP78562 749 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 SULT2A1Q06520 285 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 ZIK1Q3SY52 487 aaPredicted RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 FAM117BQ6P1L5 589 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 CHSY3Q70JA7 882 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 SCD5Q86SK9 330 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 GIPC3Q8TF64 312 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 FBXO32Q969P5 355 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 ERLEC1Q96DZ1 483 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 UROC1Q96N76 676 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 GPR62Q9BZJ7 368 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 ING2Q9H160 280 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 ADNPQ9H2P0 1102 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 EPB41L1Q9H4G0 881 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 POLR1BQ9H9Y6 1135 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 RGS18Q9NS28 235 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 OSER1Q9NX31 292 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 WARS2Q9UGM6 360 aaKnown RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 CDC14AQ9UNH5 594 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 BTRCQ9Y297 605 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 PTGDR2Q9Y5Y4 395 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 NCF1BA6NI72 391 aaPredicted RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 NCF1CA8MVU1 366 aaPredicted RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 SOCS2O14508 198 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 ANXA9O76027 345 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 NCF1P14598 390 aaPredicted RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 ZNF23P17027 643 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 CES1P23141 567 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 MAP4P27816 1152 aaKnown RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 CCR3P51677 355 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 NUP107P57740 925 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 SCAPQ12770 1279 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 SEMA3BQ13214 749 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 PSMD5Q16401 504 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 SLC44A4Q53GD3 710 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 C10orf120Q5SQS8 335 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 PM20D1Q6GTS8 502 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 SCIMPQ6UWF3 145 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 LRRC8DQ7L1W4 858 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 CIR1Q86X95 450 aaPredicted RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 SPPL2BQ8TCT7 592 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 MID1IP1Q9NPA3 183 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 PLK2Q9NYY3 685 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 PCDHB8Q9UN66 801 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 TET1Q8NFU7 2136 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 A0A087WXM4 84 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 IPO13O94829 963 aaKnown RBP10.84□□□□□ -0.67
BRF1-204ENST00000392557 SBK3P0C264 359 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 CHRM3P20309 590 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 FASP25445 335 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 AIF1P55008 147 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 ZNF789Q5FWF6 425 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 GPR158Q5T848 1215 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 GRAMD4Q6IC98 578 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 BNIPLQ7Z465 357 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 IRGQQ8WZA9 623 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 TCF12Q99081 682 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 SLC39A8Q9C0K1 460 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 NACA2Q9H009 215 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 TBC1D23Q9NUY8 699 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 TBC1D30Q9Y2I9 924 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 A0A0J9YYE9 177 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 UBA6A0AVT1 1052 aaPredicted RBP10.84□□□□□ -0.67
BRF1-204ENST00000392557 DHRS12A0PJE2 317 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 NCK1P16333 377 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 PRKCQQ04759 706 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 NSUN2Q08J23 767 aaKnown RBP eCLIP10.84□□□□□ -0.67
BRF1-204ENST00000392557 PATL1Q86TB9 770 aaKnown RBP10.84□□□□□ -0.67
BRF1-204ENST00000392557 COLGALT2Q8IYK4 626 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 GABPB2Q8TAK5 448 aaPredicted RBP10.84□□□□□ -0.67
BRF1-204ENST00000392557 LRCH3Q96II8 777 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 KLHL5Q96PQ7 755 aa10.84□□□□□ -0.67
BRF1-204ENST00000392557 TBKBP1A7MCY6 615 aa10.83□□□□□ -0.67
BRF1-204ENST00000392557 A8MT66 165 aa10.83□□□□□ -0.67
BRF1-204ENST00000392557 MTHFD1P11586 935 aaKnown RBP10.83□□□□□ -0.67
BRF1-204ENST00000392557 RPL17P18621 184 aaKnown RBP10.83□□□□□ -0.67
BRF1-204ENST00000392557 CST5P28325 142 aaPredicted RBP10.83□□□□□ -0.67
BRF1-204ENST00000392557 SLC7A1P30825 629 aa10.83□□□□□ -0.67
BRF1-204ENST00000392557 GALNT2Q10471 571 aa10.83□□□□□ -0.67
BRF1-204ENST00000392557 FRG1Q14331 258 aaKnown RBP10.83□□□□□ -0.67
BRF1-204ENST00000392557 PFKFB4Q16877 469 aa10.83□□□□□ -0.67
BRF1-204ENST00000392557 XKR5Q6UX68 686 aa10.83□□□□□ -0.67
BRF1-204ENST00000392557 RAB44Q7Z6P3 723 aaPredicted RBP10.83□□□□□ -0.67
BRF1-204ENST00000392557 CAMK1DQ8IU85 385 aa10.83□□□□□ -0.67
BRF1-204ENST00000392557 ERI1Q8IV48 349 aaKnown RBP10.83□□□□□ -0.67
BRF1-204ENST00000392557 CPSF7Q8N684 471 aaKnown RBP10.83□□□□□ -0.67
BRF1-204ENST00000392557 OR2T34Q8NGX1 318 aa10.83□□□□□ -0.67
BRF1-204ENST00000392557 OR2T3Q8NH03 318 aa10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms