RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PDLIM2Q96JY6 352 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 AGO4Q9HCK5 861 aaKnown RBP14.74□□□□□ -0.05
CCDC50-201ENST00000392455 MAZP56270 477 aaKnown RBP14.73□□□□□ -0.05
CCDC50-201ENST00000392455 FAM91A1Q658Y4 838 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF350Q9GZX5 532 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 CISHQ9NSE2 258 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 SPATA7Q9P0W8 599 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 JCHAINP01591 159 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 KLRK1P26718 216 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 RPL21P46778 160 aaKnown RBP14.73□□□□□ -0.05
CCDC50-201ENST00000392455 FAM46CQ5VWP2 391 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TFAP2DQ7Z6R9 452 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 HCAR2Q8TDS4 363 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF75CPQ92670 426 aaPredicted RBP14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TUBGCP5Q96RT8 1024 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 DDX43Q9NXZ2 648 aaKnown RBP14.73□□□□□ -0.05
CCDC50-201ENST00000392455 SNTG2Q9NY99 539 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.73□□□□□ -0.053e-8■■■■□ 22.9
CCDC50-201ENST00000392455 FBXL21Q9UKT6 434 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 ICE1Q9Y2F5 2266 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 ABHD14A-ACY1A0A1B0GW23 586 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TSPAN3O60637 253 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 PON3Q15166 354 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 SLC9B1Q4ZJI4 515 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TTMPQ5BVD1 217 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TMEM121BQ9BXQ6 578 aaPredicted RBP14.73□□□□□ -0.05
CCDC50-201ENST00000392455 CALML5Q9NZT1 146 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 DDX20Q9UHI6 824 aaKnown RBP14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TTC34A8MYJ7 566 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 PDYNP01213 254 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 IFNA2P01563 188 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TBX4P57082 545 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TSPAN5P62079 268 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 PLEKHN1Q494U1 663 aaPredicted RBP14.73□□□□□ -0.05
CCDC50-201ENST00000392455 FIGNQ5HY92 759 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 GALNTL5Q7Z4T8 443 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 ZC3H7AQ8IWR0 971 aaKnown RBP14.73□□□□□ -0.05
CCDC50-201ENST00000392455 ACER1Q8TDN7 264 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 ARL5AQ9Y689 179 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 KCNE2Q9Y6J6 123 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 CYP3A7-CYP3A51PA0A087WV96 503 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 C1QTNF3-AMACRE9PGA6 284 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TACSTD2P09758 323 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 CYP3A7P24462 503 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 ITPK1Q13572 414 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 NDUFA9Q16795 377 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 KAT2AQ92830 837 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 OSMRQ99650 979 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 PRELID1Q9Y255 219 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 A0A096LPK6 155 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 CHADO15335 359 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 PSMG1O95456 288 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 MTX3Q5HYI7 312 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF730Q6ZMV8 503 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TTC7BQ86TV6 843 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 SMG7Q92540 1137 aaKnown RBP14.73□□□□□ -0.05
CCDC50-201ENST00000392455 EDEM1Q92611 657 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 TSPAN18Q96SJ8 248 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 ATP13A3Q9H7F0 1226 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 COG5Q9UP83 839 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 PLAGL2Q9UPG8 496 aa14.73□□□□□ -0.05
CCDC50-201ENST00000392455 OAS3Q9Y6K5 1087 aaKnown RBP14.73□□□□□ -0.05
CCDC50-201ENST00000392455 HSBP1L1C9JCN9 74 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 FAM228BP0C875 321 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 MAPTP10636 758 aaKnown RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 BGNP21810 368 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 HNF4AP41235 474 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 PIWIL2Q8TC59 973 aaKnown RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 CERKQ8TCT0 537 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 TBCCD1Q9NVR7 557 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 CORO1CQ9ULV4 474 aaPredicted RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 KLRC2P26717 231 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 CLCN5P51795 746 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 GIT2Q14161 759 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 RANBP3LQ86VV4 465 aaPredicted RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 KCNK1O00180 336 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 ADAMDEC1O15204 470 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 ALDH4A1P30038 563 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 ADIGQ0VDE8 80 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 PPP1R15BQ5SWA1 713 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 FRMD7Q6ZUT3 714 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 RXFP2Q8WXD0 754 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 ELMO1Q92556 727 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 TCF12Q99081 682 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 IDI2Q9BXS1 227 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 ABCD2Q9UBJ2 740 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF510Q9Y2H8 683 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 CSDE1O75534 798 aaKnown RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 UBXN7O94888 489 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 TGDSO95455 350 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 GRIA3P42263 894 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 RGS6P49758 472 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 FASTKD3Q14CZ7 662 aaKnown RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 PDK3Q15120 406 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 LY6KQ17RY6 165 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 RNASEH2BQ5TBB1 312 aaKnown RBP14.72□□□□□ -0.05
CCDC50-201ENST00000392455 XKRXQ6PP77 449 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 MOXD1Q6UVY6 613 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 SPOCD1Q6ZMY3 1216 aa14.72□□□□□ -0.05
CCDC50-201ENST00000392455 SLC47A1Q96FL8 570 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms