RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RMND5AQ9H871 391 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 EIF2B3Q9NR50 452 aaKnown RBP14.25□□□□□ -0.13
RTF1-201ENST00000389629 VWA7Q9Y334 891 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 ARIH1Q9Y4X5 557 aaPredicted RBP14.25□□□□□ -0.13
RTF1-201ENST00000389629 PMF1-BGLAPU3KQ54 211 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 SLC22A3O75751 556 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 SPATA31D3P0C874 917 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 NDUFV1P49821 464 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 SPOUT1Q5T280 376 aaKnown RBP14.25□□□□□ -0.13
RTF1-201ENST00000389629 SPATA31D4Q6ZUB0 917 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 PGLYRP2Q96PD5 576 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 GPR63Q9BZJ6 419 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 GBA3Q9H227 469 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 ZBTB26Q9HCK0 441 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 WDR70Q9NW82 654 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 SIX4Q9UIU6 781 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 PSME2Q9UL46 239 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 ZNF214Q9UL59 606 aaPredicted RBP14.25□□□□□ -0.13
RTF1-201ENST00000389629 H3BNH8 94 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 ENDOD1O94919 500 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 IDO1P14902 403 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 XPAP23025 273 aaPredicted RBP14.25□□□□□ -0.13
RTF1-201ENST00000389629 SLC5A2P31639 672 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 RABGGTBP53611 331 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 EFEMP1Q12805 493 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 MAPKAPK3Q16644 382 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 GPR158Q5T848 1215 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 KLHL17Q6TDP4 642 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 SENP8Q96LD8 212 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 TEKT5Q96M29 485 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 ASB2Q96Q27 587 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 DUSP16Q9BY84 665 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 NXF3Q9H4D5 531 aaKnown RBP14.25□□□□□ -0.13
RTF1-201ENST00000389629 MINDY3Q9H8M7 445 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 ZNF221Q9UK13 617 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 WBP11Q9Y2W2 641 aaKnown RBP14.25□□□□□ -0.13
RTF1-201ENST00000389629 NDUFS2O75306 463 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 VPS4BO75351 444 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 ANGPTL1O95841 491 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 ODC1P11926 461 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 ADCYAP1R1P41586 468 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 HARS2P49590 506 aaKnown RBP14.25□□□□□ -0.13
RTF1-201ENST00000389629 PRIM2P49643 509 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 NDST2P52849 883 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 RAB14P61106 215 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 CDKL1Q00532 357 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 P2RY8Q86VZ1 359 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 MTFMTQ96DP5 389 aaKnown RBP14.25□□□□□ -0.13
RTF1-201ENST00000389629 XYLT2Q9H1B5 865 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 ADGRE2Q9UHX3 823 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 C2orf81A6NN90 581 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 FFAR3O14843 346 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 GPR42O15529 346 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 THP07101 528 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 LMO2P25791 158 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 MS4A2Q01362 244 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 RAB39AQ14964 217 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 LZTR1Q8N653 840 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 GPRC5AQ8NFJ5 357 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 HAPLN3Q96S86 360 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 FZD8Q9H461 694 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 FZD10Q9ULW2 581 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 BBIP1A8MTZ0 92 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 GPIP06744 558 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 GRM5P41594 1212 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 RELAQ04206 551 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 ZNF423Q2M1K9 1284 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 RRM2BQ7LG56 351 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 TMEM130Q8N3G9 435 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 MCOLN3Q8TDD5 553 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 RSPH1Q8WYR4 309 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 BCO2Q9BYV7 579 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 POLE4Q9NR33 117 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 CYP7B1O75881 506 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 CLPXO76031 633 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 IL1BP01584 269 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 CES1P23141 567 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 C9orf57Q5W0N0 161 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 ARFGAP1Q8N6T3 406 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 LRRC52Q8N7C0 313 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 TWIST2Q8WVJ9 160 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 SMARCD1Q96GM5 515 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 HERC2P3Q9BVR0 1158 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 ABCG8Q9H221 673 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 ACTR8Q9H981 624 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 EXD2Q9NVH0 621 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 COL14A1Q05707 1796 aaKnown RBP14.24□□□□□ -0.13
RTF1-201ENST00000389629 FUOMA2VDF0 154 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 FAM189A1O60320 539 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 DLX3O60479 287 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 RPL10P27635 214 aaKnown RBP14.24□□□□□ -0.13
RTF1-201ENST00000389629 WNT3AP56704 352 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 OR2T12Q8NG77 320 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 STAG3L4Q8TBR4 150 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 TRIM8Q9BZR9 551 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 CNTN6Q9UQ52 1028 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 LRP5O75197 1615 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 BCORQ6W2J9 1755 aa14.24□□□□□ -0.13
RTF1-201ENST00000389629 C5orf58C9J3I9 102 aa14.23□□□□□ -0.13
RTF1-201ENST00000389629 EIF2S1P05198 315 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms