RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 MED1Q15648 1581 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 A0A087WXM4 84 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 FAM237BA0A1B0GVD1 139 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SLC38A8A6NNN8 435 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 MAGEB3O15480 346 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 OR6B1O95007 311 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 HLA-DQA2P01906 255 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 LYNP07948 512 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 PRPS2P11908 318 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 ACADLP28330 430 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 RPL4P36578 427 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 PTGER3P43115 390 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 MASP1P48740 699 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 RPL26P61254 145 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 OVGP1Q12889 678 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SLC1A5Q15758 541 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 GPAT3Q53EU6 434 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 C10orf62Q5T681 223 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 GALNT7Q86SF2 657 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 ZNF276Q8N554 614 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 MREGQ8N565 214 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 EEF1AKMT1Q8WVE0 214 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 MTMR8Q96EF0 704 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 TLR10Q9BXR5 811 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 KCND1Q9NSA2 647 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 GEMIN8Q9NWZ8 242 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SAMD4AQ9UPU9 718 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 STXBP5LQ9Y2K9 1186 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 V9GYQ6 96 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 KERAO60938 352 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SPATA31C1P0DKV0 1188 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SMPD1P17405 629 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SUOXP51687 545 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SPIRE1Q08AE8 756 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 FAAP100Q0VG06 881 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 FAM153CQ494X1 144 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 BRAT1Q6PJG6 821 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 RTL4Q6ZR62 310 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 ARMC8Q8IUR7 673 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 AHI1Q8N157 1196 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 TEX47Q8TBZ9 253 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 ANKRD7Q92527 254 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 CATSPER2Q96P56 530 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 HAPLN3Q96S86 360 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 HOPXQ9BPY8 73 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 NUSAP1Q9BXS6 441 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 ADAM33Q9BZ11 813 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SEMA4BQ9NPR2 832 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 PRPF19Q9UMS4 504 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 L1RE1Q9UN81 338 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 TMEM150CB9EJG8 249 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 MATN3O15232 486 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 TNFAIP8O95379 198 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 C22orf31O95567 290 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 PIGRP01833 764 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 RCVRNP35243 200 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 RCN1Q15293 331 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 ECHDC2Q86YB7 292 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 PCDH20Q8N6Y1 951 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 OR10G6Q8NH81 332 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 LCN9Q8WX39 176 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 LINGO1Q96FE5 620 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SLC4A9Q96Q91 983 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 MIPEPQ99797 713 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 ACE2Q9BYF1 805 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 GSDMCQ9BYG8 508 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SHCBP1LQ9BZQ2 653 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 UNC93B1Q9H1C4 597 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 AGO3Q9H9G7 860 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 IL1RAPQ9NPH3 570 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 INTS10Q9NVR2 710 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 C19orf25Q9UFG5 118 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 GTF2IRD1Q9UHL9 959 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 HES2Q9Y543 173 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 ZNF536O15090 1300 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 YDJCA8MPS7 323 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 KCNU1A8MYU2 1149 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 E9PAM4 449 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 CCL16O15467 120 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 STK16O75716 305 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 PRR5P85299 388 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 MBTD1Q05BQ5 628 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 DGUOKQ16854 277 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 C15orf59Q2T9L4 293 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 TRIM16LQ309B1 348 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 ZCWPW2Q504Y3 356 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 PPP1R26Q5T8A7 1209 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 CPTPQ5TA50 214 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 CXXC5Q7LFL8 322 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 PHF10Q8WUB8 498 aaKnown RBP7.16□□□□□ -1.26
CCDC171-201ENST00000380701 RAB21Q9UL25 225 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 SNX7Q9UNH6 387 aa7.16□□□□□ -1.26
CCDC171-201ENST00000380701 PRORSD1PA6NEY8 169 aa7.15□□□□□ -1.26
CCDC171-201ENST00000380701 ALOX15BO15296 676 aa7.15□□□□□ -1.26
CCDC171-201ENST00000380701 ATP9AO75110 1047 aa7.15□□□□□ -1.26
CCDC171-201ENST00000380701 ZNF30P17039 623 aa7.15□□□□□ -1.26
CCDC171-201ENST00000380701 PIK3CBP42338 1070 aa7.15□□□□□ -1.26
CCDC171-201ENST00000380701 NSG1P42857 185 aa7.15□□□□□ -1.26
CCDC171-201ENST00000380701 GNPDA1P46926 289 aa7.15□□□□□ -1.26
CCDC171-201ENST00000380701 PRKCZQ05513 592 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms