RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 WDR70Q9NW82 654 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 GOLGA6AQ9NYA3 693 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 PPIL1Q9Y3C6 166 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 RNF215Q9Y6U7 377 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 LRP4O75096 1905 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 A8MX80 341 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 J3QKU1 62 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 ITGB2P05107 769 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 SERPING1P05155 500 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 RARAP10276 462 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 MX2P20592 715 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 GPR1P46091 355 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 LRP8Q14114 963 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 NR1D2Q14995 579 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 MANEAQ5SRI9 462 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 PHF19Q5T6S3 580 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 DENND2CQ68D51 928 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 ZNF765Q7L2R6 523 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 ZNF438Q7Z4V0 828 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 NLRP8Q86W28 1048 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 FATE1Q969F0 183 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 SGF29Q96ES7 293 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 ANP32EQ9BTT0 268 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 LGR4Q9BXB1 951 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 STN1Q9H668 368 aaKnown RBP14.73□□□□□ -0.05
HDAC6-204ENST00000376643 PCDH18Q9HCL0 1135 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 TAAR2Q9P1P5 351 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 ANAPC7Q9UJX3 599 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 SLC17A4Q9Y2C5 497 aa14.73□□□□□ -0.05
HDAC6-204ENST00000376643 COL27A1Q8IZC6 1860 aaPredicted RBP14.73□□□□□ -0.05
HDAC6-204ENST00000376643 B8ZZF3 427 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 PEX11BO96011 259 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 CEACAM5P06731 702 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 TPM3P06753 285 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 GM2AP17900 193 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 IL1R2P27930 398 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 ETV3P41162 512 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 SSR1P43307 286 aaKnown RBP14.72□□□□□ -0.05
HDAC6-204ENST00000376643 GNPDA1P46926 289 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 ATP1A2P50993 1020 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 RPL26P61254 145 aaKnown RBP14.72□□□□□ -0.05
HDAC6-204ENST00000376643 ZBED6P86452 979 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 ITKQ08881 620 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 TRAF2Q12933 501 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 NR1I3Q14994 352 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 PCSK4Q6UW60 755 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 ADAMTSL4Q6UY14 1074 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 C17orf82Q86X59 251 aaPredicted RBP14.72□□□□□ -0.05
HDAC6-204ENST00000376643 SLITRK4Q8IW52 837 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 NRSN1Q8IZ57 195 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 TEX26Q8N6G2 289 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 AVL9Q8NBF6 648 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 AP2M1Q96CW1 435 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 ZNF830Q96NB3 372 aaPredicted RBP14.72□□□□□ -0.05
HDAC6-204ENST00000376643 OR2M4Q96R27 311 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 ARHGAP9Q9BRR9 750 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 TMEM63CQ9P1W3 806 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 SUFUQ9UMX1 484 aa14.72□□□□□ -0.05
HDAC6-204ENST00000376643 RPL26L1Q9UNX3 145 aaKnown RBP14.72□□□□□ -0.05
HDAC6-204ENST00000376643 LRRK1Q38SD2 2015 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 NPIPB15A6NHN6 443 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-204ENST00000376643 KRT7P08729 469 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 SKILP12757 684 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 SLC2A4P14672 509 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 MAN1A1P33908 653 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 GARSP41250 739 aaKnown RBP14.71□□□□□ -0.05
HDAC6-204ENST00000376643 GPLD1P80108 840 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 B4GALNT1Q00973 533 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 SLC25A11Q02978 314 aaKnown RBP14.71□□□□□ -0.05
HDAC6-204ENST00000376643 PDK2Q15119 407 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 IFI16Q16666 785 aaKnown RBP14.71□□□□□ -0.05
HDAC6-204ENST00000376643 E4F1Q66K89 784 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-204ENST00000376643 Q6ZVL8 140 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 HSD11B1LQ7Z5J1 315 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 CBARPQ8N350 705 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-204ENST00000376643 PGBD5Q8N414 524 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 SEMA3CQ99985 751 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 ZNF670Q9BS34 389 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 NUP85Q9BW27 656 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 ZMYND15Q9H091 742 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 THAP2Q9H0W7 228 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 NT5MQ9NPB1 228 aa14.71□□□□□ -0.05
HDAC6-204ENST00000376643 ANKRD36A6QL64 1941 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 COL6A6A6NMZ7 2263 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-204ENST00000376643 GOLGA6L19H0YKK7 550 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 STMND1H3BQB6 276 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 CYP1A2P05177 515 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 FGF1P05230 155 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 LHCGRP22888 699 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 CCNCP24863 283 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 ALDH4A1P30038 563 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 ACTR1BP42025 376 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 MAPK10P53779 464 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 ACTR1AP61163 376 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 MAXP61244 160 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 GALNT2Q10471 571 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 SQSTM1Q13501 440 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 NFKBIBQ15653 356 aa14.7□□□□□ -0.06
HDAC6-204ENST00000376643 AMZ1Q400G9 498 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms