RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 GEN1Q17RS7 908 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 FAM83EQ2M2I3 478 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 CARD16Q5EG05 197 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 FAM78AQ5JUQ0 283 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 TRIM68Q6AZZ1 485 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 CCDC91Q7Z6B0 441 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 ZSWIM9Q86XI8 627 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 SPNS2Q8IVW8 549 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 UBXN10Q96LJ8 280 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 CDCA3Q99618 268 aaPredicted RBP17.66■□□□□ 0.42
CTTN-203ENST00000376561 UNKQ9C0B0 810 aaKnown RBP17.66■□□□□ 0.42
CTTN-203ENST00000376561 FBXO10Q9UK96 956 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 DCTN3O75935 186 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 CCDC166P0CW27 439 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 FDXRP22570 491 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 FSHRP23945 695 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 KPNA2P52292 529 aaKnown RBP17.66■□□□□ 0.42
CTTN-203ENST00000376561 ARFIP2P53365 341 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 CCDC15Q0P6D6 951 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 EML3Q32P44 896 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 GALNTL6Q49A17 601 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 RARS2Q5T160 578 aaKnown RBP17.66■□□□□ 0.42
CTTN-203ENST00000376561 PSAPL1Q6NUJ1 521 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 DPY19L3Q6ZPD9 716 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 PIANPQ8IYJ0 282 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 SREK1Q8WXA9 508 aaKnown RBP17.66■□□□□ 0.42
CTTN-203ENST00000376561 MYLIPQ8WY64 445 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 LPGAT1Q92604 370 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 FGF13Q92913 245 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 ASB16Q96NS5 453 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 LRRC37BQ96QE4 947 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 TMEM120AQ9BXJ8 343 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 CPEB1Q9BZB8 566 aaKnown RBP17.66■□□□□ 0.42
CTTN-203ENST00000376561 MRPL46Q9H2W6 279 aaKnown RBP17.66■□□□□ 0.42
CTTN-203ENST00000376561 IGFLR1Q9H665 355 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 ZFYVE1Q9HBF4 777 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 DZANK1Q9NVP4 752 aa17.66■□□□□ 0.42
CTTN-203ENST00000376561 FNDC3AQ9Y2H6 1198 aaKnown RBP17.66■□□□□ 0.42
CTTN-203ENST00000376561 UBA6A0AVT1 1052 aaPredicted RBP17.65■□□□□ 0.42
CTTN-203ENST00000376561 LTA4HP09960 611 aaKnown RBP17.65■□□□□ 0.42
CTTN-203ENST00000376561 ADH5P11766 374 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 POLR2EP19388 210 aaKnown RBP17.65■□□□□ 0.42
CTTN-203ENST00000376561 ARRB2P32121 409 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 HNF1BP35680 557 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 XIAPP98170 497 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 TCEAL5Q5H9L2 206 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 AGAP9Q5VTM2 703 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 TMEM207Q6UWW9 146 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 NAPRTQ6XQN6 538 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 ATG14Q6ZNE5 492 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 Q6ZVU0 165 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 PIM3Q86V86 326 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 BPIFB1Q8TDL5 484 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 ANKRD49Q8WVL7 239 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 ECHDC3Q96DC8 303 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 ASIC4Q96FT7 647 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 MRPL57Q9BQC6 102 aaKnown RBP17.65■□□□□ 0.42
CTTN-203ENST00000376561 AARSD1Q9BTE6 412 aaKnown RBP17.65■□□□□ 0.42
CTTN-203ENST00000376561 SUV39H2Q9H5I1 410 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 MARCOQ9UEW3 520 aaPredicted RBP17.65■□□□□ 0.42
CTTN-203ENST00000376561 ERVW-1Q9UQF0 538 aa17.65■□□□□ 0.42
CTTN-203ENST00000376561 C1orf232A0A0U1RR37 186 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 CAPN8A6NHC0 703 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 RFXAPO00287 272 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 NDUFS3O75489 264 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 POP4O95707 220 aaKnown RBP17.64■□□□□ 0.42
CTTN-203ENST00000376561 KITP10721 976 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 SLC26A3P40879 764 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 ABCE1P61221 599 aaKnown RBP17.64■□□□□ 0.42
CTTN-203ENST00000376561 TIAL1Q01085 375 aaKnown RBP eCLIP17.64■□□□□ 0.421e-6■□□□□ 10.9
CTTN-203ENST00000376561 SETDB1Q15047 1291 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 CDKN3Q16667 212 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 ZRANB3Q5FWF4 1079 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 SMARCD2Q92925 531 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 SORT1Q99523 831 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 APOL5Q9BWW9 433 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 FAM96AQ9H5X1 160 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 ZDHHC6Q9H6R6 413 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 ACTR5Q9H9F9 607 aaPredicted RBP17.64■□□□□ 0.42
CTTN-203ENST00000376561 SLC12A4Q9UP95 1085 aa17.64■□□□□ 0.42
CTTN-203ENST00000376561 HOXC11O43248 304 aaPredicted RBP17.64■□□□□ 0.41
CTTN-203ENST00000376561 H2AFYO75367 372 aaKnown RBP17.64■□□□□ 0.41
CTTN-203ENST00000376561 ADH1CP00326 375 aa17.64■□□□□ 0.41
CTTN-203ENST00000376561 SCTRP47872 440 aa17.64■□□□□ 0.41
CTTN-203ENST00000376561 TTPAP49638 278 aa17.64■□□□□ 0.41
CTTN-203ENST00000376561 SUOXP51687 545 aa17.64■□□□□ 0.41
CTTN-203ENST00000376561 RAD51Q06609 339 aa17.64■□□□□ 0.41
CTTN-203ENST00000376561 LIPMQ5VYY2 423 aa17.64■□□□□ 0.41
CTTN-203ENST00000376561 PIWIL2Q8TC59 973 aaKnown RBP17.64■□□□□ 0.41
CTTN-203ENST00000376561 ERP27Q96DN0 273 aa17.64■□□□□ 0.41
CTTN-203ENST00000376561 KCNK4Q9NYG8 393 aa17.64■□□□□ 0.41
CTTN-203ENST00000376561 CDH22Q9UJ99 828 aa17.64■□□□□ 0.41
CTTN-203ENST00000376561 VPS9D1Q9Y2B5 631 aa17.64■□□□□ 0.41
CTTN-203ENST00000376561 MTF2Q9Y483 593 aaPredicted RBP17.64■□□□□ 0.41
CTTN-203ENST00000376561 SCN8AQ9UQD0 1980 aa17.63■□□□□ 0.41
CTTN-203ENST00000376561 MYO1CO00159 1063 aa17.63■□□□□ 0.41
CTTN-203ENST00000376561 CLDN7O95471 211 aa17.63■□□□□ 0.41
CTTN-203ENST00000376561 CISD3P0C7P0 127 aa17.63■□□□□ 0.41
CTTN-203ENST00000376561 SP100P23497 879 aaPredicted RBP17.63■□□□□ 0.41
CTTN-203ENST00000376561 DGKGP49619 791 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms