RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 CHP1Q99653 195 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 LGR4Q9BXB1 951 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 SUDS3Q9H7L9 328 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-205ENST00000376492 KCND1Q9NSA2 647 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 ATP8A1Q9Y2Q0 1164 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 CHD5Q8TDI0 1954 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 WASH4PA8MWX3 477 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 RASA4BC9J798 803 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 CACNB4O00305 520 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-205ENST00000376492 RASA4O43374 803 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 RECQL5O94762 991 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-205ENST00000376492 CPNE6O95741 557 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 FGF3P11487 239 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-205ENST00000376492 LIFP15018 202 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 MIPP30301 263 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 HTR7P34969 479 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 SUOXP51687 545 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 RALGDSQ12967 914 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 SERINC3Q13530 473 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 PIGHQ14442 188 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-205ENST00000376492 AGERQ15109 404 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 TMEM164Q5U3C3 297 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 ERAP2Q6P179 960 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 CAMK1DQ8IU85 385 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 CCDC170Q8IYT3 715 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 NIPA2Q8N8Q9 360 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 NKD1Q969G9 470 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 CCDC74BQ96LY2 380 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 CCDC42Q96M95 316 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 NUP85Q9BW27 656 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 ADNPQ9H2P0 1102 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 DEF6Q9H4E7 631 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 SUV39H2Q9H5I1 410 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 NHEJ1Q9H9Q4 299 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-205ENST00000376492 CYP4F12Q9HCS2 524 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 SPATS2LQ9NUQ6 558 aaKnown RBP13.15□□□□□ -0.3
CLCN6-205ENST00000376492 SEPT3Q9UH03 358 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 MOSPD1Q9UJG1 213 aa13.15□□□□□ -0.3
CLCN6-205ENST00000376492 TEX15Q9BXT5 2789 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 IGHV5-10-1A0A0J9YXX1 117 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 AKR1B10O60218 316 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 PRPSAP2O60256 369 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 LRCH4O75427 683 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 GM2AP17900 193 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 EPHB2P29323 1055 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 ALDH4A1P30038 563 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 RGRP47804 291 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 ATP1A2P50993 1020 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 FOXK1P85037 733 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 BOLA3Q53S33 107 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 CYP4V2Q6ZWL3 525 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-205ENST00000376492 PIM3Q86V86 326 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 HCAR2Q8TDS4 363 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 PEBP4Q96S96 227 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-205ENST00000376492 PDFQ9HBH1 243 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 AKAP7Q9P0M2 348 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-205ENST00000376492 UBA2Q9UBT2 640 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-205ENST00000376492 PCSK1NQ9UHG2 260 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 IP6K2Q9UHH9 426 aa13.14□□□□□ -0.31
CLCN6-205ENST00000376492 SPENQ96T58 3664 aaKnown RBP13.14□□□□□ -0.31
CLCN6-205ENST00000376492 NBASA2RRP1 2371 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 SDK2Q58EX2 2172 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 PRSS38A1L453 326 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 A8MX80 341 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 J3KR12 359 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 MYO1FO00160 1098 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 FGF10O15520 208 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-205ENST00000376492 CREB3O43889 395 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 H2AFZP0C0S5 128 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 GP1BBP13224 206 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 MPSTP25325 297 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 UGT1A3P35503 534 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 HCAR3P49019 387 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 ZNF135P52742 658 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-205ENST00000376492 CA9Q16790 459 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 PARP15Q460N3 678 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 NKAIN2Q5VXU1 208 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 BRAT1Q6PJG6 821 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 H2AFVQ71UI9 128 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 ZNF438Q7Z4V0 828 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 NRROSQ86YC3 692 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 IL22RA1Q8N6P7 574 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
CLCN6-205ENST00000376492 PATE1Q8WXA2 126 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 ART4Q93070 314 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 ZNF641Q96N77 438 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-205ENST00000376492 TAAR9Q96RI9 348 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 SNRNP25Q9BV90 132 aaKnown RBP13.13□□□□□ -0.31
CLCN6-205ENST00000376492 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 WDR26Q9H7D7 661 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 CATSPERBQ9H7T0 1116 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 DONSONQ9NYP3 566 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 UVRAGQ9P2Y5 699 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 ANAPC7Q9UJX3 599 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 AP4E1Q9UPM8 1137 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 ZKSCAN5Q9Y2L8 839 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 B3GALT1Q9Y5Z6 326 aa13.13□□□□□ -0.31
CLCN6-205ENST00000376492 UNC13CQ8NB66 2214 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms