RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ATP4BP51164 291 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 MERTKQ12866 999 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 ZSWIM7Q19AV6 140 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 IRF2BP1Q8IU81 584 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 VGLL2Q8N8G2 317 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 MYO19Q96H55 970 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 VPS35Q96QK1 796 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 ZNF696Q9H7X3 374 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PLIN3O60664 434 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 ERN1O75460 977 aaKnown RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 EPHA3P29320 983 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PFKFB4Q16877 469 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PLEKHG4Q58EX7 1191 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 FGD3Q5JSP0 725 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 BORAQ6PGQ7 559 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 CYS1Q717R9 158 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PTGR2Q8N8N7 351 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 CPXM1Q96SM3 734 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PCDHGB7Q9Y5F8 929 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 FAM47E-STBD1D6RA91 191 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 AP2A1O95782 977 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PTGS2P35354 604 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 GNPDA1P46926 289 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 CREMQ03060 361 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PPP3CAQ08209 521 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 C10orf107Q8IVU9 208 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 MARVELD2Q8N4S9 558 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 GPRC5AQ8NFJ5 357 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 TRUB1Q8WWH5 349 aaKnown RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 TNFRSF25Q93038 417 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 RPL36Q9Y3U8 105 aaKnown RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 B4GALT4O60513 344 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 UGT2B17O75795 530 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 CDH1P12830 882 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PRG2P13727 222 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 CDH5P33151 784 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 NDUFA9Q16795 377 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 LINC00299Q6ZSB3 139 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PPP1R16AQ96I34 528 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 TPD52L3Q96J77 140 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 SEMA3GQ9NS98 782 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 TEX28O15482 410 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 DENRO43583 198 aaKnown RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 TLX1P31314 330 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 GALK1P51570 392 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 LAPTM5Q13571 262 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ALG11Q2TAA5 492 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 COQ5Q5HYK3 327 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 CCDC24Q8N4L8 307 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 GANCQ8TET4 914 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ZYG11BQ9C0D3 744 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 UGT2B4P06133 528 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 CETPP11597 493 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 FLT3P36888 993 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 TBX4P57082 545 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 SGO1Q5FBB7 561 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 IZUMO1Q8IYV9 350 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 TMEM161BQ8NDZ6 487 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PIH1D2Q8WWB5 315 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ZUFSPQ96AP4 578 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PANX1Q96RD7 426 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 NT5MQ9NPB1 228 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ARL15Q9NXU5 204 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 RCCD1A6NED2 376 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 CSPG5O95196 566 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 FAM163BP0C2L3 166 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 OR1E1P30953 314 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 KDELC2Q7Z4H8 507 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ADCK2Q7Z695 626 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ALYREFQ86V81 257 aaKnown RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PCDH20Q8N6Y1 951 aaKnown RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 FEM1CQ96JP0 617 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 SLC6A15Q9H2J7 730 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 COPZ2Q9P299 210 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 CNTN6Q9UQ52 1028 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 LYPLA1O75608 230 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 OR6B1O95007 311 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 MTHFRP42898 656 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PARP15Q460N3 678 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 KLHDC10Q6PID8 442 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ZNF621Q6ZSS3 439 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 CHMP1BQ7LBR1 199 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 RIOX2Q8IUF8 465 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ARMC8Q8IUR7 673 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 KBTBD2Q8IY47 623 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 SAMD14Q8IZD0 417 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ASZ1Q8WWH4 475 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 HAS1Q92839 578 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PHF12Q96QT6 1004 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 SLC7A8Q9UHI5 535 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 COQ4Q9Y3A0 265 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 KCNE2Q9Y6J6 123 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 MYH7BA7E2Y1 1941 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PEX11AO75192 247 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 CPSF4O95639 269 aaKnown RBP10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PGK1P00558 417 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 ERVK-10P10266 1014 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 AQP4P55087 323 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 RHDQ02161 417 aa10.18□□□□□ -0.78
PTCH1-204ENST00000375290 PLCL1Q15111 1095 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms