RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CIB2O75838 187 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 STC2O76061 302 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 URODP06132 367 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 F7P08709 466 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 LAG3P18627 525 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 OGNP20774 298 aaKnown RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 HOXD9P28356 352 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 GLRBP48167 497 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 RAP1GDS1P52306 607 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 EPHB3P54753 998 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 ARHGAP8P85298 464 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 CREMQ03060 361 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 PLD1Q13393 1074 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 RAB33AQ14088 237 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 ACAP2Q15057 778 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 SEL1L3Q68CR1 1132 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 NAPRTQ6XQN6 538 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 ACAD11Q709F0 780 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 TMC7Q7Z402 723 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 PTAR1Q7Z6K3 402 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 ITIH5Q86UX2 942 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 SLC22A9Q8IVM8 553 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.22□□□□□ -1.09
UBR4-202ENST00000375224 GPR65Q8IYL9 337 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 FAR2Q96K12 515 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 CNDP1Q96KN2 507 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 GPR78Q96P69 363 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 TBCCD1Q9NVR7 557 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 F8W8V4 182 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 SLC22A2O15244 555 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 SEC24AO95486 1093 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 UBTFL6P0CB48 400 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 ZCCHC18P0CG32 403 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 GMPRP36959 345 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 VHLP40337 213 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 PTDSS1P48651 473 aaKnown RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 KDSRQ06136 332 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 LIN52Q52LA3 116 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 HECTD2Q5U5R9 776 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 SLC39A11Q8N1S5 342 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 ENDOVQ8N8Q3 282 aaKnown RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 ANKK1Q8NFD2 765 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 OR7D4Q8NG98 312 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 BLOC1S5Q8TDH9 187 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 HEXDCQ8WVB3 486 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 TOP1MTQ969P6 601 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 CCDC28BQ9BUN5 200 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 KLF16Q9BXK1 252 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 DENND2DQ9H6A0 471 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 EML4Q9HC35 981 aaKnown RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 GPAMQ9HCL2 828 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 SCUBE2Q9NQ36 999 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.22□□□□□ -1.096e-16■■□□□ 13.8
UBR4-202ENST00000375224 TBC1D30Q9Y2I9 924 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 TDRKHQ9Y2W6 561 aaKnown RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 A0A0D9SEW6 157 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 H3BNC9 293 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 MATN2O00339 956 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 PRRG1O14668 218 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 PFDN6O15212 129 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 TEX28O15482 410 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 INSIG1O15503 277 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 DLX3O60479 287 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 PIGNO95427 931 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 S1PR4O95977 384 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 HSPA1AP0DMV8 641 aaKnown RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 HSPA1BP0DMV9 641 aaKnown RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 NCF2P19878 526 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 ADSLP30566 484 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 ARRB2P32121 409 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 PCYT1AP49585 367 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 NAGLUP54802 743 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 TRIM60Q495X7 471 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 MAVSQ7Z434 540 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 MFSD6LQ8IWD5 586 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 VPS37AQ8NEZ2 397 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 NMD3Q96D46 503 aaKnown RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 MYEOVQ96EZ4 313 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 VN1R3Q9BXE9 311 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 POPDC3Q9HBV1 291 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 TCF7L2Q9NQB0 619 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 TMEM39AQ9NV64 488 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 SPG21Q9NZD8 308 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 SCHIP1Q9P0W5 487 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 ZMAT5Q9UDW3 170 aaKnown RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 GPC6Q9Y625 555 aaPredicted RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 CD3EAPO15446 510 aaKnown RBP8.21□□□□□ -1.09
UBR4-202ENST00000375224 PEX11AO75192 247 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 SBK3P0C264 359 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 COPAP53621 1224 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 TUBA4AP68366 448 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 CAMK2BQ13554 666 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 UBAP2LQ14157 1087 aaKnown RBP8.21□□□□□ -1.09
UBR4-202ENST00000375224 CSHL1Q14406 222 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 ARL13AQ5H913 290 aaPredicted RBP8.21□□□□□ -1.09
UBR4-202ENST00000375224 RALGPS1Q5JS13 557 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 DDX53Q86TM3 631 aaKnown RBP8.21□□□□□ -1.09
UBR4-202ENST00000375224 TCEAL8Q8IYN2 117 aa8.21□□□□□ -1.09
UBR4-202ENST00000375224 CMTR2Q8IYT2 770 aaKnown RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms