RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 PPP1R14BQ96C90 147 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 ZHX1-C8orf76Q96EF9 292 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 KCNS3Q9BQ31 491 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 RERGLQ9H628 205 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 PLK2Q9NYY3 685 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 ATXN10Q9UBB4 475 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 ENTPD4Q9Y227 616 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 SIK3Q9Y2K2 1263 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 WBP11Q9Y2W2 641 aaKnown RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 METTL21EPA6NDL7 271 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 KPNA5O15131 536 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 GRM6O15303 877 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF217O75362 1048 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 SERPINF2P08697 491 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 CDH3P22223 829 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 MTTPP55157 894 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 IL2P60568 153 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 TAF13Q15543 124 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 SMTNL2Q2TAL5 461 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 MPPE1Q53F39 396 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 POTEHQ6S545 545 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 STOX1Q6ZVD7 989 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 ARCQ7LC44 396 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 COMMD2Q86X83 199 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 WDR49Q8IV35 697 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 Q8N9G6 341 aaPredicted RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 FBXO25Q8TCJ0 367 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 METTL21AQ8WXB1 218 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 EDEM1Q92611 657 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 ACOX2Q99424 681 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 PRKAG3Q9UGI9 489 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 LEF1Q9UJU2 399 aaPredicted RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 OGDHLQ9ULD0 1010 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 C2CD2Q9Y426 696 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 SLIT3O75094 1523 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 E2F8A0AVK6 867 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 FAM92AA1XBS5 289 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 STX16-NPEPL1H3BU86 382 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 TRIM38O00635 465 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 STX16O14662 325 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 CCR1P32246 355 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 PXNP49023 591 aaPredicted RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 SRP54P61011 504 aaKnown RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 BST2Q10589 180 aaKnown RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 COL9A3Q14050 684 aaPredicted RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 OTUD3Q5T2D3 398 aaPredicted RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 ANKS1BQ7Z6G8 1248 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 DHDDSQ86SQ9 333 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 EMC1Q8N766 993 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 POC5Q8NA72 575 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 DSN1Q9H410 356 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 EBF3Q9H4W6 596 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 MOV10Q9HCE1 1003 aaKnown RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 NUDT5Q9UKK9 219 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 GJB6O95452 261 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 VIPP01282 170 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 CYP11B1P15538 503 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 RPL22P35268 128 aaKnown RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 GATMP50440 423 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 TFF2Q03403 129 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 ENPEPQ07075 957 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 BCL2L1Q07817 233 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 BIKQ13323 160 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 ORC1Q13415 861 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 CCNIQ14094 377 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 HKDC1Q2TB90 917 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 IL27RAQ6UWB1 636 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 MILR1Q7Z6M3 343 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 SNX32Q86XE0 403 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 FUKQ8N0W3 1084 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 ARL14EPQ8N8R7 260 aaPredicted RBP6.3□□□□□ -1.4
PTPN3-202ENST00000374541 SMYD1Q8NB12 490 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 FAM172AQ8WUF8 416 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 MKL1Q969V6 931 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 PTPN18Q99952 460 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 MUC13Q9H3R2 512 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 TMEM138Q9NPI0 162 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 SLAMF7Q9NQ25 335 aa6.3□□□□□ -1.4
PTPN3-202ENST00000374541 KDM3BQ7LBC6 1761 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ARL5CA6NH57 179 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 PLK4O00444 970 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 KLK3P07288 261 aaPredicted RBP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ABHD2P08910 425 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 GJA1P17302 382 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 PON1P27169 355 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 OXTRP30559 389 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ACSM2AQ08AH3 577 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 DPYSQ14117 519 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SWI5Q1ZZU3 235 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 MANEAQ5SRI9 462 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 C9orf50Q5SZB4 431 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ACSM2BQ68CK6 577 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 RPTNQ6XPR3 784 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 SH3RF1Q7Z6J0 888 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 KCNMB4Q86W47 210 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 COLGALT2Q8IYK4 626 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 ACOT12Q8WYK0 555 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 FUBP3Q96I24 572 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPN3-202ENST00000374541 GPR174Q9BXC1 333 aa6.29□□□□□ -1.4
PTPN3-202ENST00000374541 PBX4Q9BYU1 374 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms