RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PRR23CQ6ZRP0 262 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 FUNDC1Q8IVP5 155 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 CHDHQ8NE62 594 aaPredicted RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 OSCP1Q8WVF1 389 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF669Q96BR6 464 aaPredicted RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 VPS39Q96JC1 886 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 NODALQ96S42 347 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 COQ7Q99807 217 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 CEP41Q9BYV8 373 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 SLIRPQ9GZT3 109 aaKnown RBP12.92□□□□□ -0.34
PRPF4-201ENST00000374198 LRRC4Q9HBW1 653 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 TCEAL9Q9UHQ7 104 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 ANAPC2Q9UJX6 822 aa12.92□□□□□ -0.34
PRPF4-201ENST00000374198 TCRBV5S2A0A599 114 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 DDTLA6NHG4 134 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 TCP10L2B9ZVM9 353 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 CCNE2O96020 404 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 MT-ND1P03886 318 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 KRT19P08727 400 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 THRBP10828 461 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 MTHFD1P11586 935 aaKnown RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 CSRP3P50461 194 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 ALDH3A2P51648 485 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 ARSFP54793 590 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 TCP10Q12799 353 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 NPTX1Q15818 432 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 EML3Q32P44 896 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 SLFN12LQ6IEE8 588 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 MINDY1Q8N5J2 469 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 IL17RDQ8NFM7 739 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 KCTD4Q8WVF5 259 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 HTR3CQ8WXA8 447 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 SLC30A3Q99726 388 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 BDH2Q9BUT1 245 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 ADPRHL2Q9NX46 363 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 CMTM6Q9NX76 183 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 NPAP1Q9NZP6 1156 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF70Q9UC06 446 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 SEPT9Q9UHD8 586 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 CAB39Q9Y376 341 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 PCDHB3Q9Y5E6 796 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 UBIAD1Q9Y5Z9 338 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 MN1Q10571 1320 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 CNTNAP1P78357 1384 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 ZBBXA8MT70 800 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 BBIP1A8MTZ0 92 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 MTSS1O43312 755 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 HNRNPLP14866 589 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 JAK3P52333 1124 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF135P52742 658 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 PGGT1BP53609 377 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 FPGSQ05932 587 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 FRG1Q14331 258 aaKnown RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 MEP1AQ16819 746 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 ANO4Q32M45 955 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 TSTD2Q5T7W7 516 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 CCSAPQ6IQ19 270 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 CCBE1Q6UXH8 406 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 STRADAQ7RTN6 431 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 RPL10LQ96L21 214 aaKnown RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 SNRNP25Q9BV90 132 aaKnown RBP12.91□□□□□ -0.34
PRPF4-201ENST00000374198 DEFB129Q9H1M3 183 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 STMN3Q9NZ72 180 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 XPR1Q9UBH6 696 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 NAALAD2Q9Y3Q0 740 aa12.91□□□□□ -0.34
PRPF4-201ENST00000374198 CENPXA8MT69 81 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 NDST3O95803 873 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 SAT1P21673 171 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 GRIK1P39086 918 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 ASPAP45381 313 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 NR2C2P49116 596 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 HUNKP57058 714 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 PSMD5Q16401 504 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF280DQ6N043 979 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 APOBEC3HQ6NTF7 200 aaKnown RBP12.9□□□□□ -0.34
PRPF4-201ENST00000374198 PIWIL4Q7Z3Z4 852 aaKnown RBP12.9□□□□□ -0.34
PRPF4-201ENST00000374198 GALNT12Q8IXK2 581 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 SMG8Q8ND04 991 aaKnown RBP12.9□□□□□ -0.34
PRPF4-201ENST00000374198 MCPH1Q8NEM0 835 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 RMDN1Q96DB5 314 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 MCMBPQ9BTE3 642 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 ASPSCR1Q9BZE9 553 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 POLR3FQ9H1D9 316 aaPredicted RBP12.9□□□□□ -0.34
PRPF4-201ENST00000374198 RUBCNLQ9H714 662 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 GIMAP4Q9NUV9 329 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 SPEF1Q9Y4P9 236 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 ALPLP05186 524 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 MYL3P08590 195 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 UMPSP11172 480 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 IMPDH1P20839 514 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 MAGP20916 626 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 VEGFBP49765 207 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 JAG1P78504 1218 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 DAG1Q14118 895 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 CAPRIN1Q14444 709 aaKnown RBP12.9□□□□□ -0.34
PRPF4-201ENST00000374198 GRM3Q14832 879 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 ZNF484Q5JVG2 852 aa12.9□□□□□ -0.34
PRPF4-201ENST00000374198 TWF2Q6IBS0 349 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms