RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 FCRL3Q96P31 734 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-203ENST00000374116 DDX50Q9BQ39 737 aaKnown RBP14.32□□□□□ -0.12
HMGA1-203ENST00000374116 TRPV5Q9NQA5 729 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 THAP1Q9NVV9 213 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 SLC17A6Q9P2U8 582 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 WNT16Q9UBV4 365 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 PSAT1Q9Y617 370 aa14.32□□□□□ -0.12
HMGA1-203ENST00000374116 H0Y626 953 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 GSC2O15499 205 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 HOXC11O43248 304 aaPredicted RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 MAFKO60675 156 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 KRT36O76013 467 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 MYL2P10916 166 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 SERPINB3P29508 390 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 CD70P32970 193 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 SPRP35270 261 aaPredicted RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 RAP1GDS1P52306 607 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ITGA9Q13797 1035 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 HNRNPDQ14103 355 aaKnown RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 NAPEPLDQ6IQ20 393 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 LINC00523Q86TU6 105 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 HJURPQ8NCD3 748 aaPredicted RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 FLCNQ8NFG4 579 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ZNF669Q96BR6 464 aaPredicted RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ERLEC1Q96DZ1 483 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ZNF419Q96HQ0 510 aaPredicted RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 NSL1Q96IY1 281 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 CELF6Q96J87 481 aaKnown RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 IL22Q9GZX6 179 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 CATSPERBQ9H7T0 1116 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ABCB8Q9NUT2 735 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 MARK1Q9P0L2 795 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 FAM86C2PA6NEL3 165 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 USP12O75317 370 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 JCHAINP01591 159 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ASLP04424 464 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 CRABP2P29373 138 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 HLA-FP30511 346 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 SEC13P55735 322 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 SIGLEC14Q08ET2 396 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 OLIG2Q13516 323 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 CDH18Q13634 790 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 MAP7Q14244 749 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 UBXN2BQ14CS0 331 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 GEN1Q17RS7 908 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ANKRD20A4Q4UJ75 823 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 FASTKD1Q53R41 847 aaKnown RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 RABGAP1LQ5R372 815 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 N4BP2L1Q5TBK1 243 aaPredicted RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 CES3Q6UWW8 571 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ARHGAP36Q6ZRI8 547 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 KBTBD2Q8IY47 623 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ALDH16A1Q8IZ83 802 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ST13P4Q8IZP2 240 aaPredicted RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 KIAA1958Q8N8K9 716 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 RTL3Q8N8U3 475 aaKnown RBP14.31□□□□□ -0.12
HMGA1-203ENST00000374116 SORCS1Q8WY21 1168 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ISL2Q96A47 359 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 IL12RB2Q99665 862 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 RBBP8Q99708 897 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 P2RY13Q9BPV8 354 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 SIKE1Q9BRV8 207 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 SLC39A8Q9C0K1 460 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 WWP1Q9H0M0 922 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 EMCNQ9ULC0 261 aa14.31□□□□□ -0.12
HMGA1-203ENST00000374116 ZCWPW2A0A1B0GU75 182 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 TYW5A2RUC4 315 aaKnown RBP14.3□□□□□ -0.12
HMGA1-203ENST00000374116 PLIN3O60664 434 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 GSRP00390 522 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 EGFP01133 1207 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 CISD3P0C7P0 127 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 MZF1P28698 734 aaPredicted RBP14.3□□□□□ -0.12
HMGA1-203ENST00000374116 TYK2P29597 1187 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 MAGEA12P43365 314 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 DGKGP49619 791 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 CLCN2P51788 898 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 INHBCP55103 352 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 CDH17Q12864 832 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 CES4AQ5XG92 561 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 FSTL4Q6MZW2 842 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 TRIM67Q6ZTA4 783 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 ACAD11Q709F0 780 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 ADGRG6Q86SQ4 1221 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 RALGPS2Q86X27 583 aaPredicted RBP14.3□□□□□ -0.12
HMGA1-203ENST00000374116 LRRC49Q8IUZ0 686 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 ARHGAP24Q8N264 748 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 ZNF513Q8N8E2 541 aaPredicted RBP14.3□□□□□ -0.12
HMGA1-203ENST00000374116 PPP1R14CQ8TAE6 165 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 NAT14Q8WUY8 206 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 STMN2Q93045 179 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 PPP1R2P1Q96PQ5 205 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 ZYG11BQ9C0D3 744 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 NOL6Q9H6R4 1146 aaKnown RBP14.3□□□□□ -0.12
HMGA1-203ENST00000374116 TBC1D17Q9HA65 648 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 DEC1Q9P2X7 70 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 SOX13Q9UN79 622 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 AAR2Q9Y312 384 aaKnown RBP14.3□□□□□ -0.12
HMGA1-203ENST00000374116 KIAA1549LQ6ZVL6 1849 aa14.3□□□□□ -0.12
HMGA1-203ENST00000374116 IGLV3-10A0A075B6K4 115 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms