RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 BPIFA1Q9NP55 256 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 NCKIPSDQ9NZQ3 722 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 HACD3Q9P035 362 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 PRKAG2Q9UGJ0 569 aa19.57■□□□□ 0.72
HDAC1-201ENST00000373548 INTS6Q9UL03 887 aaKnown RBP19.57■□□□□ 0.72
HDAC1-201ENST00000373548 B2RBV5 119 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 STX7O15400 261 aaKnown RBP19.56■□□□□ 0.72
HDAC1-201ENST00000373548 ZBTB14O43829 449 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 TLL1O43897 1013 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 RFPL2O75678 378 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 IPO13O94829 963 aaKnown RBP19.56■□□□□ 0.72
HDAC1-201ENST00000373548 PRAMEF12O95522 483 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 ZNF37AP17032 561 aaPredicted RBP19.56■□□□□ 0.72
HDAC1-201ENST00000373548 MC4RP32245 332 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 KCNC1P48547 511 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 SLC20A2Q08357 652 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 PLEKHG6Q3KR16 790 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 CAMK1DQ8IU85 385 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 PIANPQ8IYJ0 282 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 RIN3Q8TB24 985 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 POF1BQ8WVV4 589 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 PTERQ96BW5 349 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 MYO19Q96H55 970 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 OR52B2Q96RD2 323 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.56■□□□□ 0.72
HDAC1-201ENST00000373548 EVLQ9UI08 416 aaPredicted RBP19.56■□□□□ 0.72
HDAC1-201ENST00000373548 MED16Q9Y2X0 877 aa19.56■□□□□ 0.72
HDAC1-201ENST00000373548 PGLSO95336 258 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 CD1DP15813 335 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 EPHA5P54756 1037 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 EPHB1P54762 984 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 PEX6Q13608 980 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 ARMC12Q5T9G4 340 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 SEL1L3Q68CR1 1132 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 PSAPL1Q6NUJ1 521 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 UBE2Q1Q7Z7E8 422 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 SUGP1Q8IWZ8 645 aaKnown RBP19.55■□□□□ 0.72
HDAC1-201ENST00000373548 CMTM8Q8IZV2 173 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 SPPL3Q8TCT6 385 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 PIH1D2Q8WWB5 315 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 FAM136AQ96C01 138 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 CD248Q9HCU0 757 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 ZNF711Q9Y462 761 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 MYO7AQ13402 2215 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 NOTCH4Q99466 2003 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 SPECC1L-ADORA2AF8WAN1 911 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 MOSPD3O75425 235 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 NDUFS3O75489 264 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 BMP1P13497 986 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 CTPS1P17812 591 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 FMO4P31512 558 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 PLK1P53350 603 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 EID2BQ96D98 161 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 CNDP1Q96KN2 507 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 LMLNQ96KR4 655 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 TCF7L2Q9NQB0 619 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 ABCB8Q9NUT2 735 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.55■□□□□ 0.72
HDAC1-201ENST00000373548 SLC4A7Q9Y6M7 1214 aa19.55■□□□□ 0.72
HDAC1-201ENST00000373548 E9PBE3 544 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 H7C0S8 307 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 KLHL41O60662 606 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 ZNF821O75541 412 aaPredicted RBP19.54■□□□□ 0.72
HDAC1-201ENST00000373548 WFS1O76024 890 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 NCF2P19878 526 aaPredicted RBP19.54■□□□□ 0.72
HDAC1-201ENST00000373548 SERPINB5P36952 375 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 PDAP1Q13442 181 aaKnown RBP19.54■□□□□ 0.72
HDAC1-201ENST00000373548 TEAD2Q15562 447 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 SETMARQ53H47 684 aaPredicted RBP19.54■□□□□ 0.72
HDAC1-201ENST00000373548 PSRC1Q6PGN9 363 aaPredicted RBP19.54■□□□□ 0.72
HDAC1-201ENST00000373548 KDM1BQ8NB78 822 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 RBM15BQ8NDT2 890 aaKnown RBP19.54■□□□□ 0.72
HDAC1-201ENST00000373548 MAGEC3Q8TD91 643 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 AGAP11Q8TF27 550 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 USP13Q92995 863 aaPredicted RBP19.54■□□□□ 0.72
HDAC1-201ENST00000373548 WDR55Q9H6Y2 383 aaPredicted RBP19.54■□□□□ 0.72
HDAC1-201ENST00000373548 MAGEE1Q9HCI5 957 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 TLR9Q9NR96 1032 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 IL17CQ9P0M4 197 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 VTI1BQ9UEU0 232 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 GOLGA8QA0A0J9YX86 632 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 GOLGA8OA6NCC3 632 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 GOLGA8NF8WBI6 632 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 SLCO1B7G3V0H7 640 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 SRP72O76094 671 aaKnown RBP19.54■□□□□ 0.72
HDAC1-201ENST00000373548 RHOBTB1O94844 696 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 ALPIP09923 528 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 HNRNPLP14866 589 aaKnown RBP eCLIP19.54■□□□□ 0.721e-6■□□□□ 10.5
HDAC1-201ENST00000373548 GKP32189 559 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 CSNK1DP48730 415 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 LYSMD3Q7Z3D4 306 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 SPRED2Q7Z698 418 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 TMPRSS6Q8IU80 811 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 SLC22A9Q8IVM8 553 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 PHF21BQ96EK2 531 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 OSBPL1AQ9BXW6 950 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 NUF2Q9BZD4 464 aa19.54■□□□□ 0.72
HDAC1-201ENST00000373548 FNDC3AQ9Y2H6 1198 aaKnown RBP19.54■□□□□ 0.72
HDAC1-201ENST00000373548 PDE4DIPQ5VU43 2346 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 TMEM233B4DJY2 109 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms