RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 ANP32DO95626 131 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 JUNP05412 331 aaKnown RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 ADH1AP07327 375 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 CD1DP15813 335 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 GJA1P17302 382 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 PSMA3P25788 255 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 CDC25CP30307 473 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 FMO4P31512 558 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 CPOXP36551 454 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 KCNC1P48547 511 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 RAP1GDS1P52306 607 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 EPHB1P54762 984 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 SLC7A9P82251 487 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 PTPRRQ15256 657 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 KHDC1Q4VXA5 237 aaKnown RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 WLSQ5T9L3 541 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 HTR3DQ70Z44 454 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 BBS7Q8IWZ6 715 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 ELMOD1Q8N336 334 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 LPGAT1Q92604 370 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 PTERQ96BW5 349 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 LRRC3Q9BY71 257 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 EML4Q9HC35 981 aaKnown RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 BPIFA1Q9NP55 256 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 FKBPLQ9UIM3 349 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 FNDC3AQ9Y2H6 1198 aaKnown RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 TRAV19A0A0A6YYK7 116 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 H0Y3Z8 333 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 SRP72O76094 671 aaKnown RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 CSPG5O95196 566 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 LMNAP02545 664 aaKnown RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 LINC00271P0C7V0 271 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 CDKN1CP49918 316 aaPredicted RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 SLC25A3Q00325 362 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 KLF10Q13118 480 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 NAA25Q14CX7 972 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 PREPLQ4J6C6 727 aaPredicted RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 SWT1Q5T5J6 900 aaKnown RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 NXNQ6DKJ4 435 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 RETSATQ6NUM9 610 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 LILRA6Q6PI73 481 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 FBXO46Q6PJ61 603 aaPredicted RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 TPGS1Q6ZTW0 290 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 ULK2Q8IYT8 1036 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 WDR60Q8WVS4 1066 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 TM6SF2Q9BZW4 377 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 DCLRE1BQ9H816 532 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 EBF2Q9HAK2 575 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 IL23AQ9NPF7 189 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 DNMT3BQ9UBC3 853 aaKnown RBP17.86■□□□□ 0.45
CTSA-204ENST00000372484 ZNF510Q9Y2H8 683 aa17.86■□□□□ 0.45
CTSA-204ENST00000372484 RHOBTB1O94844 696 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 MC4RP32245 332 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 RALGPS1Q5JS13 557 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 RPS27LQ71UM5 84 aaKnown RBP17.85■□□□□ 0.45
CTSA-204ENST00000372484 NECAB2Q7Z6G3 386 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 KREMEN2Q8NCW0 462 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 STON2Q8WXE9 905 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 EXT2Q93063 718 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 CLPTM1LQ96KA5 538 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 GCNAQ96QF7 691 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 CORO1BQ9BR76 489 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 TAS2R13Q9NYV9 303 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 HACD3Q9P035 362 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 FAM50BQ9Y247 325 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 DOCK6Q96HP0 2047 aa17.85■□□□□ 0.45
CTSA-204ENST00000372484 A0A0U1RQS6 177 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 TRPC5OSA6NMA1 111 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 SMIM24O75264 130 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 TPBGLP0DKB5 382 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 COX4I1P13073 169 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 IMPDH1P20839 514 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 SP100P23497 879 aaPredicted RBP17.84■□□□□ 0.45
CTSA-204ENST00000372484 PRDX6P30041 224 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 SULT2A1Q06520 285 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 MPPE1Q53F39 396 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 ACSBG2Q5FVE4 666 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 FRMD7Q6ZUT3 714 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 CPXM2Q8N436 756 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 ENDOVQ8N8Q3 282 aaKnown RBP17.84■□□□□ 0.45
CTSA-204ENST00000372484 OR6K2Q8NGY2 324 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 ARMC5Q96C12 935 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 CCDC28BQ9BUN5 200 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 G3BP2Q9UN86 482 aaKnown RBP17.84■□□□□ 0.45
CTSA-204ENST00000372484 VPS9D1Q9Y2B5 631 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 FIS1Q9Y3D6 152 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 NRG2O14511 850 aaPredicted RBP17.84■□□□□ 0.45
CTSA-204ENST00000372484 PFDN6O15212 129 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 SMAD6O43541 496 aaKnown RBP17.84■□□□□ 0.45
CTSA-204ENST00000372484 FZD6O60353 706 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 TTPAP49638 278 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 AP1S1P61966 158 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 ZRANB3Q5FWF4 1079 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 ARMC12Q5T9G4 340 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 PSAPL1Q6NUJ1 521 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 PIANPQ8IYJ0 282 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 TTC30BQ8N4P2 665 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 USP13Q92995 863 aaPredicted RBP17.84■□□□□ 0.45
CTSA-204ENST00000372484 ACDQ96AP0 544 aa17.84■□□□□ 0.45
CTSA-204ENST00000372484 SYTL2Q9HCH5 934 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms