RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 ABCG8Q9H221 673 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 COMMD3Q9UBI1 195 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 CYTH4Q9UIA0 394 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 BTRCQ9Y297 605 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 CCDC163A0A0D9SF12 145 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 DNASE1L1P49184 302 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 PPP3R1P63098 170 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 XKRXQ6PP77 449 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 HTR3CQ8WXA8 447 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 KAT2AQ92830 837 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 MKL1Q969V6 931 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 C12orf71A8MTZ7 269 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 OR10H2O60403 315 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 CCNB1P14635 433 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 ZNF7P17097 686 aaPredicted RBP15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 ERVK-9P63128 1117 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 KCNV1Q6PIU1 500 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 ANKRA2Q9H9E1 313 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 DNPEPQ9ULA0 475 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 RFX7Q2KHR2 1363 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 PEX11AO75192 247 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 DRG2P55039 364 aaKnown RBP15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 RHOAP61586 193 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 PARP6Q2NL67 630 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 ARCQ7LC44 396 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 AMIGO1Q86WK6 493 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 KATNAL2Q8IYT4 538 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 SLC37A3Q8NCC5 494 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 ASB15Q8WXK1 588 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 CPSF4LA6NMK7 179 aaKnown RBP15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 DISC1C4P0D8 188 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 TSTD3H0UI37 97 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 RFXANKO14593 260 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 FARS2O95363 451 aaKnown RBP15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 CCR1P32246 355 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 SSX2Q16385 188 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 USP30Q70CQ3 517 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 ZNF627Q7L945 461 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 ZNF571Q7Z3V5 609 aaPredicted RBP15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 FBXO32Q969P5 355 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 TSNAXQ99598 290 aaKnown RBP15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 RHBGQ9H310 441 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 AGPAT3Q9NRZ7 376 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 SEMA3GQ9NS98 782 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 SUCOQ9UBS9 1254 aaKnown RBP15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 A8MV72 311 aaPredicted RBP15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 ILF2Q12905 390 aaKnown RBP15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 KRBOX4Q5JUW0 171 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 IRAK1BP1Q5VVH5 260 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 FAM91A1Q658Y4 838 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 UFD1Q92890 307 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 MAGEL2Q9UJ55 1249 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 HSPB11Q9Y547 144 aa15.3■□□□□ 0.04
GTF3C4-201ENST00000372146 ANXA5P08758 320 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 RRP1BQ14684 758 aaKnown RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 SNX33Q8WV41 574 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 LACRTQ9GZZ8 138 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 TBCCD1Q9NVR7 557 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 GMIPQ9P107 970 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 IKZF2Q9UKS7 526 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 NDUFS2O75306 463 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 PCDH8O95206 1070 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 WEE1P30291 646 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 CREB5Q02930 508 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 GPR162Q16538 588 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 DET1Q7L5Y6 550 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 APTXQ7Z2E3 356 aaKnown RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 DNAAF5Q86Y56 855 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 RFKQ969G6 155 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 POP5Q969H6 163 aaKnown RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 HSPA12BQ96MM6 686 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 MIPEPQ99797 713 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 SCN8AQ9UQD0 1980 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 DCLK1O15075 740 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 PAPSS2O95340 614 aaPredicted RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 TSPAN8P19075 237 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 SLC12A3P55017 1021 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 PCDH1Q08174 1060 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 LRRN1Q6UXK5 716 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 FAM131BQ86XD5 332 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 B3GNT4Q9C0J1 378 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 INTS7Q9NVH2 962 aaKnown RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 PRDM15P57071 1507 aaPredicted RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 LINGO3P0C6S8 592 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 SCGB2B2Q4G0G5 96 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 TCEAL6Q6IPX3 200 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 CDC42BPGQ6DT37 1551 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 XKRYO14609 159 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 GSC2O15499 205 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 PGLSO95336 258 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 HGFP14210 728 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 ALKBH2Q6NS38 261 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 NIPAL1Q6NVV3 410 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 ZNF512BQ96KM6 892 aaPredicted RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 KCNN3Q9UGI6 736 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 RPL26L1Q9UNX3 145 aaKnown RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 PDE2AO00408 941 aaPredicted RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 CTSHP09668 335 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 TFAP2DQ7Z6R9 452 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 TRMT2AQ8IZ69 625 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms