RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 MECRQ9BV79 373 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 CRYL1Q9Y2S2 319 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 WASF2Q9Y6W5 498 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 A8MX80 341 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 IGFBP4P22692 258 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 PMLP29590 882 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 GJA4P35212 333 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 POLD2P49005 469 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 SLC12A2P55011 1212 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 POU4F1Q01851 419 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 PEX6Q13608 980 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 INSCQ1MX18 579 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 LRRC73Q5JTD7 316 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 KYAT3Q6YP21 454 aaKnown RBP16.79■□□□□ 0.28
PHGDH-202ENST00000369409 RGS9BPQ6ZS82 235 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 USP45Q70EL2 814 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 SDCCAG8Q86SQ7 713 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-202ENST00000369409 TSPAN33Q86UF1 283 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 PHTF2Q8N3S3 785 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 ZNF75CPQ92670 426 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-202ENST00000369409 OLFM1Q99784 485 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 RPP25Q9BUL9 199 aaKnown RBP16.79■□□□□ 0.28
PHGDH-202ENST00000369409 TMEM216Q9P0N5 145 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 TLK1Q9UKI8 766 aa16.79■□□□□ 0.28
PHGDH-202ENST00000369409 H7C0S8 307 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 PLIN3O60664 434 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 LEFTY1O75610 366 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 CLDN7O95471 211 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 GSTA1P08263 222 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 NEFHP12036 1026 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 EIF4HQ15056 248 aaKnown RBP16.78■□□□□ 0.28
PHGDH-202ENST00000369409 CDKN3Q16667 212 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 ZSCAN26Q16670 478 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 FNDC3BQ53EP0 1204 aaKnown RBP16.78■□□□□ 0.28
PHGDH-202ENST00000369409 ZRANB3Q5FWF4 1079 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 PSAPL1Q6NUJ1 521 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 LYSMD1Q96S90 227 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 FAM96AQ9H5X1 160 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 IL36AQ9UHA7 158 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 PLA2G4CQ9UP65 541 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 ANKRD6Q9Y2G4 727 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 TRIOBPQ9H2D6 2365 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 GPR39O43194 453 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 PROCP04070 461 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 CTSLP07711 333 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 BGNP21810 368 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 CDKN1CP49918 316 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-202ENST00000369409 SF3A3Q12874 501 aaKnown RBP eCLIP16.78■□□□□ 0.281e-9■■■■□ 22.2
PHGDH-202ENST00000369409 ARSIQ5FYB1 569 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 HECTD2Q5U5R9 776 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 FOXR1Q6PIV2 292 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 PIANPQ8IYJ0 282 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 SMRP1Q8NCR6 262 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 CHFRQ96EP1 664 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 MCCC1Q96RQ3 725 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-202ENST00000369409 SLCO1B3Q9NPD5 702 aa16.78■□□□□ 0.28
PHGDH-202ENST00000369409 INTS10Q9NVR2 710 aaKnown RBP16.78■□□□□ 0.28
PHGDH-202ENST00000369409 PLXNB3Q9ULL4 1909 aa16.77■□□□□ 0.28
PHGDH-202ENST00000369409 UBA6A0AVT1 1052 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-202ENST00000369409 ECI2O75521 394 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 HLA-EP13747 358 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 CRABP2P29373 138 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 XIAPP98170 497 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 LRIT3Q3SXY7 679 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 LRRC66Q68CR7 880 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 FAM45BPQ6NSW5 357 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 CRTC1Q6UUV9 634 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 FAM151BQ6UXP7 276 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 TPRG1Q6ZUI0 275 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 CENPLQ8N0S6 344 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-202ENST00000369409 FAM45AQ8TCE6 357 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 KCTD4Q8WVF5 259 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 SCRN2Q96FV2 425 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 TSNARE1Q96NA8 513 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 TRMT61BQ9BVS5 477 aaKnown RBP16.77■□□□□ 0.27
PHGDH-202ENST00000369409 C1QTNF1Q9BXJ1 281 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 MANSC1Q9H8J5 431 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 PPIL1Q9Y3C6 166 aa16.77■□□□□ 0.27
PHGDH-202ENST00000369409 EYSQ5T1H1 3165 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 A0A1W2PQ67 120 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 DNAJC6O75061 913 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 BPGMP07738 259 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 LHCGRP22888 699 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 CDKN2DP55273 166 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 COL19A1Q14993 1142 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 ZNF549Q6P9A3 640 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 BRAT1Q6PJG6 821 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 SPNS2Q8IVW8 549 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 LPGAT1Q92604 370 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 TSPAN17Q96FV3 270 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 ELAC2Q9BQ52 826 aaKnown RBP16.76■□□□□ 0.27
PHGDH-202ENST00000369409 BRD9Q9H8M2 597 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 CORO1CQ9ULV4 474 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-202ENST00000369409 ACOT9Q9Y305 439 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 SLC30A1Q9Y6M5 507 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 NUMBLQ9Y6R0 609 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 TBC1D3BA6NDS4 549 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 NDUFS3O75489 264 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 PRAMEF1O95521 474 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 ZNF234Q14588 700 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms