RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 A0A0U1RQJ8 604 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 EME2A4GXA9 379 aaPredicted RBP18.92■□□□□ 0.62
CKS1B-203ENST00000368439 TAF4O00268 1085 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 TNFRSF10CO14798 259 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 IPO7O95373 1038 aaKnown RBP18.92■□□□□ 0.62
CKS1B-203ENST00000368439 GP1BAP07359 652 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 MYCLP1P12525 358 aaPredicted RBP18.92■□□□□ 0.62
CKS1B-203ENST00000368439 ZNF30P17039 623 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 CA4P22748 312 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 PTPN3P26045 913 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 STC1P52823 247 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 EPHB1P54762 984 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 E2F1Q01094 437 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 WASHC5Q12768 1159 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 BBS12Q6ZW61 710 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 BZW1Q7L1Q6 419 aaKnown RBP18.92■□□□□ 0.62
CKS1B-203ENST00000368439 RD3Q7Z3Z2 195 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 HEATR4Q86WZ0 1026 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 SLC35F3Q8IY50 421 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 ZCCHC14Q8WYQ9 949 aaKnown RBP18.92■□□□□ 0.62
CKS1B-203ENST00000368439 RBM41Q96IZ5 413 aaKnown RBP18.92■□□□□ 0.62
CKS1B-203ENST00000368439 TEKT5Q96M29 485 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 RBM15Q96T37 977 aaKnown RBP eCLIP18.92■□□□□ 0.62
CKS1B-203ENST00000368439 SLC25A51Q9H1U9 297 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 SEPT10Q9P0V9 454 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 CD84Q9UIB8 345 aa18.92■□□□□ 0.62
CKS1B-203ENST00000368439 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.92■□□□□ 0.62
CKS1B-203ENST00000368439 ARHGEF17Q96PE2 2063 aaPredicted RBP18.92■□□□□ 0.62
CKS1B-203ENST00000368439 GRID2IPA4D2P6 1211 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 ANKRD66B4E2M5 251 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 CLDN7O95471 211 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 TNFP01375 233 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 FUCA1P04066 466 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 CEACAM5P06731 702 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 ANXA6P08133 673 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 KELP23276 732 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 CTNNA2P26232 953 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 CD68P34810 354 aaPredicted RBP18.91■□□□□ 0.62
CKS1B-203ENST00000368439 DUSP3P51452 185 aaPredicted RBP18.91■□□□□ 0.62
CKS1B-203ENST00000368439 CDK3Q00526 305 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 ELOCQ15369 112 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 SLC14A2Q15849 920 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 CDCP2Q5VXM1 449 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 GUSBP11Q6P575 273 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 LVRNQ6Q4G3 990 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 ZNF765Q7L2R6 523 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 NT5DC3Q86UY8 548 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 NLRP8Q86W28 1048 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 RAVER1Q8IY67 606 aaKnown RBP18.91■□□□□ 0.62
CKS1B-203ENST00000368439 SDR16C5Q8N3Y7 309 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 TFB1MQ8WVM0 346 aaKnown RBP18.91■□□□□ 0.62
CKS1B-203ENST00000368439 P3H4Q92791 437 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 SCAMP4Q969E2 229 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 FRMD8Q9BZ67 464 aaPredicted RBP18.91■□□□□ 0.62
CKS1B-203ENST00000368439 GLOD4Q9HC38 313 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 DNPEPQ9ULA0 475 aa18.91■□□□□ 0.62
CKS1B-203ENST00000368439 SCN8AQ9UQD0 1980 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 TRABD2BA6NFA1 517 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 OPA1O60313 960 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 CTSEP14091 401 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 JUPP14923 745 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 COPS2P61201 443 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 TARDBPQ13148 414 aaKnown RBP eCLIP18.9■□□□□ 0.62
CKS1B-203ENST00000368439 TCEA2Q15560 299 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 CCDC50Q8IVM0 306 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 DCBLD1Q8N8Z6 715 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 SPATA22Q8NHS9 363 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 IFI44Q8TCB0 444 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 KIAA1524Q8TCG1 905 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 PTCD2Q8WV60 388 aaKnown RBP18.9■□□□□ 0.62
CKS1B-203ENST00000368439 ALG3Q92685 438 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 HAUS1Q96CS2 278 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 EID2BQ96D98 161 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 WDR24Q96S15 920 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 AGAP2Q99490 1192 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 DESI2Q9BSY9 194 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 MLPHQ9BV36 600 aaPredicted RBP18.9■□□□□ 0.62
CKS1B-203ENST00000368439 HEMGNQ9BXL5 484 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 PHPT1Q9NRX4 125 aaPredicted RBP18.9■□□□□ 0.62
CKS1B-203ENST00000368439 NCKIPSDQ9NZQ3 722 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 TRIM10Q9UDY6 481 aa18.9■□□□□ 0.62
CKS1B-203ENST00000368439 PRSS38A1L453 326 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 CCDC66A2RUB6 948 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 APOC4-APOC2K7ER74 178 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 PDE2AO00408 941 aaPredicted RBP18.89■□□□□ 0.61
CKS1B-203ENST00000368439 MT-CYBP00156 380 aaPredicted RBP18.89■□□□□ 0.61
CKS1B-203ENST00000368439 APOC2P02655 101 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 PTPN7P35236 360 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 GALNT3Q14435 633 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 NR0B2Q15466 257 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 PERM1Q5SV97 790 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 RAET1GQ6H3X3 334 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 ADAMTSL4Q6UY14 1074 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 ZC3H18Q86VM9 953 aaKnown RBP18.89■□□□□ 0.61
CKS1B-203ENST00000368439 NRSN1Q8IZ57 195 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 PDCD7Q8N8D1 485 aaKnown RBP18.89■□□□□ 0.61
CKS1B-203ENST00000368439 MDM1Q8TC05 714 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 AP2M1Q96CW1 435 aa18.89■□□□□ 0.61
CKS1B-203ENST00000368439 QKIQ96PU8 341 aaKnown RBP eCLIP18.89■□□□□ 0.612e-10■■■■■ 36
CKS1B-203ENST00000368439 TMEM168Q9H0V1 697 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms