RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 PITPNM1O00562 1244 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 PAPSS2O95340 614 aaPredicted RBP12.43□□□□□ -0.42
TPR-201ENST00000367478 FSHRP23945 695 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 IGFBP5P24593 272 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 ATP5C1P36542 298 aaKnown RBP12.43□□□□□ -0.42
TPR-201ENST00000367478 PSMD5Q16401 504 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 PRR23CQ6ZRP0 262 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 FAM13CQ8NE31 585 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 TBC1D16Q8TBP0 767 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 CPNE2Q96FN4 548 aaPredicted RBP12.43□□□□□ -0.42
TPR-201ENST00000367478 PTPRHQ9HD43 1115 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 TFR2Q9UP52 801 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 AP2A2O94973 939 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 KLRC2P26717 231 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 GABRB2P47870 512 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 RAPSNQ13702 412 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 ARMC10Q8N2F6 343 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 TESCQ96BS2 214 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 TMEM27Q9HBJ8 222 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 GLI2P10070 1586 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 OR1I1O60431 355 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 PVALBP20472 110 aaPredicted RBP12.43□□□□□ -0.42
TPR-201ENST00000367478 GRB10Q13322 594 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 THAP5Q7Z6K1 395 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 LGI2Q8N0V4 545 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 SNX33Q8WV41 574 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 AP2M1Q96CW1 435 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 MBOAT7Q96N66 472 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 FADS3Q9Y5Q0 445 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 PREX2Q70Z35 1606 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 TLX3O43711 291 aaPredicted RBP12.43□□□□□ -0.42
TPR-201ENST00000367478 NDUFS2O75306 463 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 RPL38P63173 70 aaKnown RBP12.43□□□□□ -0.42
TPR-201ENST00000367478 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
TPR-201ENST00000367478 SVOPLQ8N434 492 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 TKTL2Q9H0I9 626 aa12.43□□□□□ -0.42
TPR-201ENST00000367478 URB1O60287 2271 aaKnown RBP12.43□□□□□ -0.42
TPR-201ENST00000367478 ADAM17P78536 824 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 SNAPC1Q16533 368 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 LACTB2Q53H82 288 aaPredicted RBP12.42□□□□□ -0.42
TPR-201ENST00000367478 FAM46CQ5VWP2 391 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 MREGQ8N565 214 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 CELF6Q96J87 481 aaKnown RBP12.42□□□□□ -0.42
TPR-201ENST00000367478 PRAMEF33A0A0G2JMD5 474 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 PRAMEF10O60809 474 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 HSPA14Q0VDF9 509 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 PM20D2Q8IYS1 436 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 PTGR2Q8N8N7 351 aaPredicted RBP12.42□□□□□ -0.42
TPR-201ENST00000367478 DNMT3LQ9UJW3 386 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 NINQ8N4C6 2090 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 FAM205CA6NFA0 338 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 OR2AT4A6NND4 320 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 AKAP3O75969 853 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 KDELR1P24390 212 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 DNASE1L1P49184 302 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 CDC42EP5Q6NZY7 148 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 PAMR1Q6UXH9 720 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 UBR7Q8N806 425 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 RAB2BQ8WUD1 216 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 MARCH2Q9P0N8 246 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 SLC33A1O00400 549 aaPredicted RBP12.42□□□□□ -0.42
TPR-201ENST00000367478 AZIN1O14977 448 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 RARAP10276 462 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 FAAH2Q6GMR7 532 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 NDNQ99608 321 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 MND1Q9BWT6 205 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 GPATCH2LQ9NWQ4 482 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 PCDHGB1Q9Y5G3 927 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 ALDH4A1P30038 563 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 MIPP30301 263 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 MFSD10Q14728 455 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 TXNRD3Q86VQ6 643 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 OR2T34Q8NGX1 318 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 OR2T3Q8NH03 318 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 PRELID1Q9Y255 219 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 PDE4DIPQ5VU43 2346 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 GPIP06744 558 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 CCNB1P14635 433 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 CHKAP35790 457 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 STXBP1P61764 594 aaKnown RBP12.42□□□□□ -0.42
TPR-201ENST00000367478 TSPAN5P62079 268 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 LIPEQ05469 1076 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 KLHL22Q53GT1 634 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 USP49Q70CQ1 688 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 SLC41A1Q8IVJ1 513 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 FAM47BQ8NA70 645 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 EDEM1Q92611 657 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 TIFAQ96CG3 184 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 CEP170Q5SW79 1584 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 TRAV19A0A0A6YYK7 116 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 NOL4O94818 638 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 MTHFD1P11586 935 aaKnown RBP12.42□□□□□ -0.42
TPR-201ENST00000367478 TFEBP19484 476 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 DDR1Q08345 913 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 METTL7BQ6UX53 244 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 LAPTM4BQ86VI4 370 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 ZNF433Q8N7K0 673 aaPredicted RBP12.42□□□□□ -0.42
TPR-201ENST00000367478 CPB2Q96IY4 423 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 ARHGAP20Q9P2F6 1191 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 PIGBOS1A0A0B4J2F0 54 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms