RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 ALDH1A2O94788 518 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 VAPBO95292 243 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 BRAFP15056 766 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 TNFRSF4P43489 277 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 ARCN1P48444 511 aaKnown RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 CDKN3Q16667 212 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 TSTD2Q5T7W7 516 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 LYSMD3Q7Z3D4 306 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 MMAAQ8IVH4 418 aaKnown RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 CYP4X1Q8N118 509 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 RIBC1Q8N443 379 aaPredicted RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 KDM1BQ8NB78 822 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 BRSK1Q8TDC3 778 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 SPDL1Q96EA4 605 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 DNAJC1Q96KC8 554 aaKnown RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 SLC6A17Q9H1V8 727 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 C8orf33Q9H7E9 229 aaPredicted RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 NKIRAS1Q9NYS0 192 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 TBK1Q9UHD2 729 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 GGT7Q9UJ14 662 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 NDRG2Q9UN36 371 aaKnown RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 DUSP12Q9UNI6 340 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 HEATR9A2RTY3 570 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 EME2A4GXA9 379 aaPredicted RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 AP3B1O00203 1094 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 KPNA3O00505 521 aaPredicted RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 AHCYL1O43865 530 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 CDH16O75309 829 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 ATP5HO75947 161 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 CLDN7O95471 211 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 FESP07332 822 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 RPSAP08865 295 aaKnown RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 PRSS56P0CW18 603 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 LHCGRP22888 699 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 STX2P32856 288 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 GRIA4P48058 902 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 CCNG1P51959 295 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 RAD51Q06609 339 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 STAT4Q14765 748 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 PUS10Q3MIT2 529 aaKnown RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 HSP90AA5PQ58FG0 334 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 SPANXN3Q5MJ09 141 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 GLT6D1Q7Z4J2 308 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 TTC30BQ8N4P2 665 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 PIP4K2CQ8TBX8 421 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 MGARPQ8TDB4 240 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 FAM3CQ92520 227 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 ARRDC3Q96B67 414 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 CERS2Q96G23 380 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 ZNF641Q96N77 438 aaPredicted RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 RANBP9Q96S59 729 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 CD320Q9NPF0 282 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 THEGQ9P2T0 379 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 PPM1HQ9ULR3 514 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 FAM50BQ9Y247 325 aa12.23□□□□□ -0.45
CAPN9-203ENST00000366666 MTF2Q9Y483 593 aaPredicted RBP12.23□□□□□ -0.45
CAPN9-203ENST00000366666 MAGEB16A2A368 324 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 KRBA1A5PL33 1030 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 FAM159BA6NKW6 160 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 GPR39O43194 453 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 SMNDC1O75940 238 aaKnown RBP eCLIP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 KLF8O95600 359 aaPredicted RBP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 IL1BP01584 269 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 COL9A1P20849 921 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 CA4P22748 312 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 PHBP35232 272 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 MSH2P43246 934 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 GRSF1Q12849 480 aaKnown RBP eCLIP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 SF3A3Q12874 501 aaKnown RBP eCLIP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 CCINQ13939 588 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 ELAVL3Q14576 367 aaKnown RBP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 RFLNAQ6ZTI6 216 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 PARS2Q7L3T8 475 aaKnown RBP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 HOMEZQ8IX15 550 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 CTAGE3PQ8IX95 158 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 PPM1NQ8N819 430 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 TXNDC5Q8NBS9 432 aaKnown RBP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 OR4K2Q8NGD2 314 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 TBATAQ96M53 351 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 RAB3IPQ96QF0 476 aaPredicted RBP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 PAFAH2Q99487 392 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 NAT9Q9BTE0 207 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 C20orf96Q9NUD7 363 aaPredicted RBP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 EURLQ9NYK6 297 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 ITM2BQ9Y287 266 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 FNDC3AQ9Y2H6 1198 aaKnown RBP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 ZNF711Q9Y462 761 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 ZNF106Q9H2Y7 1883 aaKnown RBP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 C16orf96A6NNT2 1141 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 TIMP2P16035 220 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 CREB1P16220 341 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 TSHRP16473 764 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 ABCG1P45844 678 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 ZNF140P52738 457 aaPredicted RBP12.22□□□□□ -0.45
CAPN9-203ENST00000366666 IL9RQ01113 521 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 PFKPQ01813 784 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 UGP2Q16851 508 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 ZNF805Q5CZA5 627 aa12.22□□□□□ -0.45
CAPN9-203ENST00000366666 CAPRIN2Q6IMN6 1127 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms